Detailed information NTG0970718

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: WIF35_RS08335
• Genome accession: NZ_CP150631
• Coordinates: 1699236..1700594 (-)
• Length: 452 a.a.
• NCBI ID: WP_412481101.1
• Uniprot ID: -
• Organism: Azonexus sp. IMCC34839
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1694236..1705594

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WIF35_RS08320	-	1695615..1697459 (+)	1845	WP_412481099.1	phosphoenolpyruvate carboxykinase (GTP)	-
WIF35_RS08325	-	1697530..1698693 (+)	1164	WP_412481100.1	pyridoxal phosphate-dependent aminotransferase	-
WIF35_RS08330	ampD	1698670..1699236 (-)	567	WP_412481228.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
WIF35_RS08335	pilR	1699236..1700594 (-)	1359	WP_412481101.1	sigma-54-dependent transcriptional regulator	Regulator
WIF35_RS08340	-	1700585..1701880 (-)	1296	WP_412481102.1	sensor histidine kinase	-
WIF35_RS08345	-	1702147..1702380 (-)	234	WP_412481103.1	PP0621 family protein	-
WIF35_RS08350	-	1702732..1702986 (+)	255	WP_412481104.1	helix-turn-helix transcriptional regulator	-
WIF35_RS08355	-	1703013..1703543 (-)	531	WP_412481105.1	hypothetical protein	-
WIF35_RS08360	-	1703829..1705094 (-)	1266	WP_412481106.1	competence protein CoiA family protein	-

Sequence

Protein

• Length: 452 a.a.
• Molecular weight: 49663.49 Da
• Isoelectric Point: 4.8125

>NTDB_id=970718 WIF35_RS08335 WP_412481101.1 1699236..1700594(-) (pilR) [Azonexus sp. IMCC34839]
MSLVRTERRPRGEMNRVLVVDDEADIRELIDLTLARMGLAAECVGSVGEALAALGEGAFQLCLTDMRLPDGEGLEIVRHI
TEHYPQTPVAVITAYGSAENAVAALKAGAFDYLAKPVGLDQLRALVKSALRLPEGGQENDPLQSLIGDSPSMQQVRAMIE
KLARSQAPIYISGESGSGKELAARLVHSRSSRSAGPFVPVNCGAIPENLMESEFFGYRKGAFTGADSDRDGFFQAANGGT
LFLDEVADLPLAMQVKLLRAIQEKRVRKVGSVTEEPVDVRIICATHRNLRECVDKGSFRQDLYYRLNVIELRMPPLRERL
EDIAPLVEAILRRLGGEHHPVLTSDAMRALEQYPFPGNVRELENILERALALCSGESVETDDLHLEPEECSAADGDGEGR
GSETLDDYLNRLERQAILEALQKTDGNRTAAARLLGVTFRSMRYRLERLGIE

Nucleotide

• Length: 1359 bp

>NTDB_id=970718 WIF35_RS08335 WP_412481101.1 1699236..1700594(-) (pilR) [Azonexus sp. IMCC34839]
GTGTCACTAGTCAGAACCGAACGCCGGCCACGCGGCGAAATGAATCGCGTACTGGTCGTCGATGATGAAGCGGATATCCG
GGAGCTGATCGACTTGACCTTAGCCCGCATGGGCTTGGCGGCGGAGTGCGTCGGTTCGGTCGGGGAGGCGTTGGCAGCGC
TGGGCGAAGGAGCTTTCCAGCTATGCTTGACCGACATGCGTCTGCCGGATGGCGAAGGCTTGGAGATCGTGCGCCACATC
ACCGAGCATTATCCGCAGACGCCGGTGGCCGTCATTACCGCCTACGGCAGTGCCGAAAATGCCGTAGCCGCGCTCAAGGC
AGGCGCATTCGACTATCTGGCCAAGCCGGTCGGTCTCGATCAGTTGCGGGCTCTGGTCAAATCAGCGCTGCGCTTGCCGG
AAGGCGGGCAGGAAAACGATCCGCTACAGTCGCTGATTGGCGATTCGCCGAGCATGCAGCAGGTGCGGGCAATGATCGAG
AAACTCGCCCGTAGTCAGGCGCCGATCTATATTTCCGGCGAGTCGGGGAGCGGCAAGGAGTTGGCAGCGCGTTTGGTCCA
TAGCCGCAGTTCGCGCAGTGCCGGCCCCTTTGTGCCGGTGAACTGTGGCGCTATCCCAGAAAACCTGATGGAGAGCGAAT
TCTTCGGCTATCGCAAGGGGGCTTTTACCGGTGCCGACAGCGATCGCGATGGTTTTTTCCAGGCCGCCAACGGTGGTACC
TTGTTCCTCGACGAAGTCGCCGACCTGCCGCTGGCCATGCAGGTCAAGCTGTTGCGCGCCATTCAGGAAAAGCGTGTGCG
CAAGGTGGGGAGCGTCACCGAGGAGCCGGTGGACGTGCGCATCATTTGCGCTACCCATCGCAATCTGCGCGAATGCGTAG
ACAAAGGCAGCTTCCGCCAGGATCTCTACTATCGCTTGAACGTGATCGAGTTACGCATGCCGCCACTGCGTGAGCGTCTG
GAGGATATTGCACCGTTGGTCGAGGCGATACTTCGCCGTCTGGGCGGAGAGCATCATCCGGTGCTGACCTCGGATGCCAT
GCGGGCCTTGGAGCAGTATCCCTTCCCGGGGAATGTGCGTGAACTCGAGAATATCCTCGAGCGCGCCTTGGCCCTCTGCT
CGGGTGAAAGCGTCGAAACTGACGATCTGCACCTCGAACCGGAGGAGTGCTCGGCTGCCGACGGCGACGGCGAGGGGCGT
GGTAGCGAGACGCTGGACGACTATCTCAATCGACTTGAGCGTCAGGCGATTCTCGAAGCCTTGCAGAAGACGGATGGCAA
CCGCACGGCCGCGGCGCGCCTGCTCGGTGTGACCTTCCGGTCCATGCGCTATCGTCTCGAACGGCTCGGCATCGAATGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (145-311)

• Bacterial regulatory protein, Fis family (HTH_8) (411-448)

• Response regulator receiver domain (Response_reg) (17-126)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.729	97.788	0.584
pilR	Acinetobacter baumannii strain A118	46.537	100	0.476
luxO	Vibrio cholerae strain A1552	38.462	97.788	0.376