Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   SOZ35_RS16615 Genome accession   NZ_CP150480
Coordinates   3272210..3274516 (-) Length   768 a.a.
NCBI ID   WP_106033958.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain TL401     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3267210..3279516
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOZ35_RS16575 (SOZ35_16575) - 3267681..3268112 (+) 432 WP_003327161.1 Na(+)/H(+) antiporter subunit B -
  SOZ35_RS16580 (SOZ35_16580) - 3268112..3268453 (+) 342 WP_003327160.1 Na(+)/H(+) antiporter subunit C -
  SOZ35_RS16585 (SOZ35_16585) - 3268446..3269927 (+) 1482 WP_340639772.1 Na+/H+ antiporter subunit D -
  SOZ35_RS16590 (SOZ35_16590) - 3269933..3270409 (+) 477 WP_003327158.1 Na+/H+ antiporter subunit E -
  SOZ35_RS16595 (SOZ35_16595) - 3270409..3270693 (+) 285 WP_003327157.1 Na(+)/H(+) antiporter subunit F1 -
  SOZ35_RS16600 (SOZ35_16600) mnhG 3270677..3271051 (+) 375 WP_003327156.1 monovalent cation/H(+) antiporter subunit G -
  SOZ35_RS16605 (SOZ35_16605) - 3271090..3271470 (-) 381 WP_340639773.1 hotdog fold thioesterase -
  SOZ35_RS16610 (SOZ35_16610) comA 3271488..3272129 (-) 642 WP_340639774.1 response regulator transcription factor Regulator
  SOZ35_RS16615 (SOZ35_16615) comP 3272210..3274516 (-) 2307 WP_106033958.1 two-component system sensor histidine kinase ComP Regulator
  SOZ35_RS16620 (SOZ35_16620) comX 3274530..3274697 (-) 168 WP_106033957.1 competence pheromone ComX Regulator
  SOZ35_RS16625 (SOZ35_16625) comQ 3274681..3275583 (-) 903 WP_106034023.1 polyprenyl synthetase family protein Regulator
  SOZ35_RS16630 (SOZ35_16630) degQ 3275768..3275911 (-) 144 WP_003327149.1 degradation enzyme regulation protein DegQ Regulator
  SOZ35_RS16635 (SOZ35_16635) - 3276371..3276730 (+) 360 WP_327851480.1 hypothetical protein -
  SOZ35_RS16640 (SOZ35_16640) - 3276749..3277981 (-) 1233 WP_003327147.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88875.37 Da        Isoelectric Point: 8.1825

>NTDB_id=970509 SOZ35_RS16615 WP_106033958.1 3272210..3274516(-) (comP) [Bacillus atrophaeus strain TL401]
MKNLIKKFTIAVIVLSVLYVCYIAYINMNGIIIGTKVDKNNKNQLVIEEISESSYGQFVGLRQGDTILKINEGKPTEKHT
KWGYLSHINSLDIIRNGKIIHLEDFDLVTLNRPYSFFLFVLPLVFYFLSIICIFYILKVSKIRKSFAGYILILLLLDISI
AYISAGGPFRGHRINRYINLFTFISSPILYLQFIQGYLKEIGKTFLNSLIFFLYIIPILNIVIEFIGYNQVNYDILANIN
LVSFAALTLFAFISIYFHLNKYKYSEHSFILKLLILTNTLSFAPFLIFYVLPIILTGNYIFPALASASLLVLIPFGLVYQ
FVANKLFDIEFILGRMRYYALLAIIPTLFIVGALVWFDLVKIQMNPARQTVFIFVVMFAVFYFKEVIDFKFRLKRFSEKF
NYQDSIFKYTQLMRSVTSFQQVFKELKNSILEVLLVSKAHTFEVASDNKVIYLDKQEIEPEWHLYQKEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVVLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMQIEELMDHLKDLKQEGTNPIWLKKLM
FAIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEDPCKNEVQDKLVQMNQQMSDVILMTRETCHELRPQLLYDL
GLVKALSKLVAQQQESAPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAMKHSQAGEVLIMLISFQNKIVLHYEDDGV
GFDKEKLNEQSMSMGLSGIKERVRALDGHLRIDTSVGNGLRADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=970509 SOZ35_RS16615 WP_106033958.1 3272210..3274516(-) (comP) [Bacillus atrophaeus strain TL401]
TTGAAGAACTTGATAAAAAAATTCACAATAGCTGTAATTGTTTTAAGTGTTCTCTATGTTTGCTATATAGCATATATCAA
TATGAATGGTATTATTATTGGCACTAAGGTTGATAAAAATAATAAAAATCAACTTGTAATTGAAGAAATTTCGGAGTCTT
CTTATGGACAATTTGTTGGTCTCAGACAGGGAGATACCATTTTAAAAATTAATGAAGGAAAACCAACAGAAAAGCATACA
AAATGGGGCTATTTGAGTCACATTAACAGTTTGGATATTATAAGAAATGGAAAAATAATTCATCTTGAAGATTTTGATTT
AGTTACTTTAAATAGACCGTATAGTTTCTTTCTGTTCGTACTTCCTTTGGTTTTTTATTTTTTAAGTATAATCTGCATTT
TTTATATACTTAAGGTAAGTAAGATAAGAAAATCATTTGCTGGGTATATTCTTATTTTGTTGTTGTTAGACATTTCAATA
GCATATATAAGTGCAGGTGGGCCATTTAGGGGACATAGAATAAATAGATATATAAATTTGTTTACTTTCATATCCTCTCC
TATTCTTTATCTTCAGTTTATTCAAGGATATCTTAAAGAAATAGGAAAAACCTTTTTGAATAGTTTAATCTTTTTTCTCT
ATATCATACCAATATTGAATATTGTGATTGAGTTTATAGGCTATAATCAAGTTAATTATGACATTTTAGCGAATATTAAC
TTAGTTTCTTTTGCAGCCTTAACTCTATTTGCTTTTATATCTATATACTTTCATCTGAATAAATATAAATATTCTGAGCA
TTCATTTATTCTTAAACTATTAATTCTAACAAATACACTTTCATTTGCGCCATTTTTGATATTTTATGTTCTCCCGATTA
TACTCACAGGGAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTGCTCGTACTTATCCCGTTCGGATTAGTGTATCAA
TTTGTTGCCAATAAACTGTTTGATATAGAATTTATTTTAGGAAGAATGAGATATTATGCTCTCCTTGCTATCATACCGAC
TCTATTCATAGTTGGGGCATTAGTGTGGTTTGATTTAGTGAAAATACAGATGAATCCTGCACGCCAAACTGTATTTATTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTTATAGATTTTAAATTTCGATTAAAACGTTTCTCTGAAAAATTC
AATTATCAGGACAGTATTTTTAAATACACTCAGCTAATGAGGAGCGTAACTTCTTTTCAACAAGTCTTTAAAGAACTGAA
AAATTCAATTTTAGAAGTTTTACTCGTAAGCAAAGCCCATACCTTTGAAGTTGCTTCTGACAACAAAGTGATATATTTAG
ATAAGCAGGAAATTGAACCGGAGTGGCACCTTTATCAAAAGGAATTTGAGAACGTAACATCAGAAATCGGGAAAATTATC
GAAGTTAATCAAGGCTTTCTCATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTGTGCTTTGTTTGTCCAACATTAA
CACCCCTAGACTGACCCGTGATGAAATCTCATGGCTGAAGACATTGTCTTTTTACACTAGTGTATCAATGGAAAATGTCA
TGCAGATTGAAGAACTGATGGATCACCTGAAAGATTTAAAGCAAGAGGGAACGAATCCAATATGGCTGAAAAAACTCATG
TTCGCCATCGAAGAAAAACAACGATCCGACCTGGCGCGTGACCTCCATGACTCCGTTCTTCAGGATTTGATCTCCTTAAA
ACGGCAATGCGAGCTGTTTCTTGCTGATTTTAAGAAGGAAGATCCTTGTAAGAATGAGGTGCAGGACAAGCTGGTGCAAA
TGAATCAGCAGATGTCTGATGTGATTTTGATGACGAGGGAGACGTGCCATGAATTGCGGCCGCAGCTCTTGTATGATTTG
GGATTGGTAAAGGCGCTGTCAAAGCTTGTTGCGCAGCAGCAGGAAAGCGCGCCGTTTCATATTCGGCTGAATACGGGAAG
GTTTACGGCATCGCTCGATCTTGATTCTCAGCTGAATTTGTACCGGATTATTCAAGAGTTTTTATCAAATGCCATGAAGC
ATTCCCAAGCCGGCGAGGTGCTGATTATGCTGATCAGTTTTCAAAATAAAATCGTTCTTCATTATGAGGATGACGGCGTT
GGCTTTGATAAGGAAAAATTGAATGAACAATCGATGAGTATGGGGCTTTCGGGCATTAAAGAGCGGGTTCGTGCGTTAGA
CGGGCACCTTCGGATCGATACAAGCGTAGGAAATGGATTGCGAGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

85.974

100

0.862


Multiple sequence alignment