Detailed information NTG0968832

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: J215_RS18800
• Genome accession: NZ_CP176783
• Coordinates: 4038562..4039233 (-)
• Length: 223 a.a.
• NCBI ID: WP_003119958.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain J215
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4033562..4044233

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J215_RS18780	-	4034899..4035918 (+)	1020	Protein_3715	chemotaxis protein	-
J215_RS18785	-	4036288..4036824 (+)	537	Protein_3716	methyl-accepting chemotaxis protein	-
J215_RS18790 (J215_003683)	-	4036829..4037137 (-)	309	WP_003113384.1	hypothetical protein	-
J215_RS18795 (J215_003684)	carS	4037228..4038565 (-)	1338	WP_003090493.1	two-component system sensor histidine kinase CarS	-
J215_RS18800 (J215_003685)	ciaR	4038562..4039233 (-)	672	WP_003119958.1	two-component system response regulator CarR	Regulator
J215_RS18805 (J215_003686)	-	4039233..4039547 (-)	315	WP_003097704.1	PepSY domain-containing protein	-
J215_RS18810 (J215_003687)	-	4039547..4039855 (-)	309	WP_003090497.1	PepSY domain-containing protein	-
J215_RS18815 (J215_003688)	-	4040070..4041152 (+)	1083	WP_003113385.1	hypothetical protein	-
J215_RS18820 (J215_003689)	-	4041179..4042072 (+)	894	WP_003116712.1	hypothetical protein	-
J215_RS18825 (J215_003690)	-	4042056..4042322 (+)	267	WP_003115326.1	DUF5329 domain-containing protein	-
J215_RS18830 (J215_003691)	-	4042323..4043516 (-)	1194	WP_003119957.1	NnrS family protein	-
J215_RS18835 (J215_003692)	ppyR	4043503..4043760 (-)	258	WP_003090502.1	psl/pyoverdine operon transcriptional regulator PpyR	-

Sequence

Protein

• Length: 223 a.a.
• Molecular weight: 24757.25 Da
• Isoelectric Point: 5.8445

>NTDB_id=968832 J215_RS18800 WP_003119958.1 4038562..4039233(-) (ciaR) [Pseudomonas aeruginosa strain J215]
MRLLLVEDHVPLADELMASLTRQGYAVDWLADGRDAAVQGASEPYDLIILDLGLPGRPGLEILQEWRGLGLATPVLILTA
RGSWAERIDGLKAGADDYLTKPFHPEELALRIQALLRRVHGLANQSQLEAAGLRLDEQRQCVCLNGADVDLTAAEFRLLR
YFMLHPGQVLSKGHLAEHLYDGETERDSNVIEVHVNHLRRKLGREVIETRRGQGYRYAGVAAG

Nucleotide

• Length: 672 bp

>NTDB_id=968832 J215_RS18800 WP_003119958.1 4038562..4039233(-) (ciaR) [Pseudomonas aeruginosa strain J215]
ATGCGGTTGCTGCTGGTTGAGGATCACGTTCCCCTGGCCGACGAACTGATGGCCAGCCTGACCCGCCAGGGCTACGCGGT
GGACTGGCTGGCCGACGGCCGCGACGCGGCGGTGCAGGGCGCCAGCGAGCCCTACGATCTGATCATCCTCGACCTCGGCT
TGCCCGGGCGTCCCGGCCTGGAGATACTCCAGGAGTGGCGTGGGCTGGGACTCGCGACTCCGGTGCTGATCCTCACCGCG
CGCGGTTCCTGGGCCGAACGCATCGATGGGCTCAAGGCCGGTGCCGACGACTACCTGACCAAGCCGTTCCATCCGGAAGA
GCTGGCCTTGCGCATCCAGGCCCTGTTGCGCCGCGTCCATGGGCTGGCCAACCAGAGCCAGCTGGAGGCCGCCGGGCTGC
GCCTGGACGAGCAGCGCCAGTGCGTGTGCCTGAACGGCGCCGACGTCGACCTGACCGCCGCCGAATTCCGCCTGCTGCGC
TATTTCATGCTGCACCCCGGCCAGGTCCTGTCCAAGGGGCACCTGGCCGAGCATCTGTACGACGGCGAGACCGAACGCGA
TTCCAACGTCATCGAGGTCCACGTCAACCACCTGCGGCGCAAGCTCGGCCGCGAGGTGATCGAGACCCGCCGTGGCCAGG
GCTACCGCTACGCCGGGGTGGCCGCCGGATGA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (4-112)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (147-216)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus mutans UA159	37.727	98.655	0.372
ciaR	Streptococcus pneumoniae Rx1	37.273	98.655	0.368
ciaR	Streptococcus pneumoniae D39	37.273	98.655	0.368
ciaR	Streptococcus pneumoniae R6	37.273	98.655	0.368
ciaR	Streptococcus pneumoniae TIGR4	37.273	98.655	0.368
micA	Streptococcus pneumoniae Cp1015	35.683	100	0.363
vicR	Streptococcus mutans UA159	35.526	100	0.363