Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | OO774_RS01550 | Genome accession | NZ_AP026763 |
| Coordinates | 326568..327161 (+) | Length | 197 a.a. |
| NCBI ID | WP_264904120.1 | Uniprot ID | - |
| Organism | Vibrio sp. STUT-A11 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 321568..332161
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO774_RS01535 (VspSTUT11_02530) | - | 322292..324859 (-) | 2568 | WP_264904117.1 | PBP1A family penicillin-binding protein | - |
| OO774_RS01540 (VspSTUT11_02540) | pilM | 325003..326016 (+) | 1014 | WP_264904118.1 | type IV pilus assembly protein PilM | Machinery gene |
| OO774_RS01545 (VspSTUT11_02550) | pilN | 326000..326575 (+) | 576 | WP_264904119.1 | PilN domain-containing protein | Machinery gene |
| OO774_RS01550 (VspSTUT11_02560) | pilO | 326568..327161 (+) | 594 | WP_264904120.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| OO774_RS01555 (VspSTUT11_02570) | pilP | 327151..327666 (+) | 516 | WP_264904121.1 | pilus assembly protein PilP | Machinery gene |
| OO774_RS01560 (VspSTUT11_02580) | pilQ | 327695..329425 (+) | 1731 | WP_264904122.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| OO774_RS01565 (VspSTUT11_02590) | aroK | 329614..330132 (+) | 519 | WP_014233147.1 | shikimate kinase AroK | - |
| OO774_RS01570 (VspSTUT11_02600) | aroB | 330165..331265 (+) | 1101 | WP_264904123.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23069.59 Da Isoelectric Point: 4.8002
>NTDB_id=96792 OO774_RS01550 WP_264904120.1 326568..327161(+) (pilO) [Vibrio sp. STUT-A11]
MVNWQDLEMDEIAEWPLIPQLIAIILFILLLQGAGYWFYLMPKQERLNDLIQQEETLKVALRIKANKVAALPQLQSQLDE
LSTRYELLLRQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSDHFLYRLPLNIELTGDFHDIGRFSQAIATLPRII
TFQDVAWQRVSQESETLHFRVRANTYQFKPEDKVDEK
MVNWQDLEMDEIAEWPLIPQLIAIILFILLLQGAGYWFYLMPKQERLNDLIQQEETLKVALRIKANKVAALPQLQSQLDE
LSTRYELLLRQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSDHFLYRLPLNIELTGDFHDIGRFSQAIATLPRII
TFQDVAWQRVSQESETLHFRVRANTYQFKPEDKVDEK
Nucleotide
Download Length: 594 bp
>NTDB_id=96792 OO774_RS01550 WP_264904120.1 326568..327161(+) (pilO) [Vibrio sp. STUT-A11]
ATGGTTAATTGGCAAGATCTGGAAATGGATGAGATTGCTGAGTGGCCGCTAATTCCTCAGTTGATAGCCATTATTCTGTT
CATTCTTCTACTCCAAGGCGCTGGTTATTGGTTTTACCTGATGCCCAAGCAAGAACGATTAAACGACCTCATTCAGCAGG
AAGAAACACTCAAAGTTGCGTTACGAATTAAAGCCAACAAAGTTGCCGCATTACCTCAGCTGCAATCTCAGTTGGATGAG
CTAAGCACGCGTTACGAATTGCTGTTGCGCCAATTGCCTGCTCAGAAAGAGTTAGCCACTATGCTGGCGTCCGTCAATGA
GCTCGGGATAGACAACAAACTGACTTTCACCCGCATTGACTGGGGAGAAAAGCAGTCAGATCACTTCTTATATCGACTGC
CACTAAATATCGAGTTAACCGGTGATTTTCATGACATCGGTCGCTTCTCACAAGCTATTGCGACCTTGCCGCGCATCATT
ACTTTTCAAGATGTGGCTTGGCAGCGCGTTAGCCAGGAAAGTGAAACGCTGCATTTCCGCGTAAGAGCGAACACCTATCA
GTTCAAACCAGAGGACAAGGTAGATGAGAAATAA
ATGGTTAATTGGCAAGATCTGGAAATGGATGAGATTGCTGAGTGGCCGCTAATTCCTCAGTTGATAGCCATTATTCTGTT
CATTCTTCTACTCCAAGGCGCTGGTTATTGGTTTTACCTGATGCCCAAGCAAGAACGATTAAACGACCTCATTCAGCAGG
AAGAAACACTCAAAGTTGCGTTACGAATTAAAGCCAACAAAGTTGCCGCATTACCTCAGCTGCAATCTCAGTTGGATGAG
CTAAGCACGCGTTACGAATTGCTGTTGCGCCAATTGCCTGCTCAGAAAGAGTTAGCCACTATGCTGGCGTCCGTCAATGA
GCTCGGGATAGACAACAAACTGACTTTCACCCGCATTGACTGGGGAGAAAAGCAGTCAGATCACTTCTTATATCGACTGC
CACTAAATATCGAGTTAACCGGTGATTTTCATGACATCGGTCGCTTCTCACAAGCTATTGCGACCTTGCCGCGCATCATT
ACTTTTCAAGATGTGGCTTGGCAGCGCGTTAGCCAGGAAAGTGAAACGCTGCATTTCCGCGTAAGAGCGAACACCTATCA
GTTCAAACCAGAGGACAAGGTAGATGAGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
88.421 |
96.447 |
0.853 |
| pilO | Vibrio cholerae strain A1552 |
73.822 |
96.954 |
0.716 |