Detailed information NTG0966814

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: ACKWPP_RS00765
• Genome accession: NZ_CP176418
• Coordinates: 121467..121874 (+)
• Length: 135 a.a.
• NCBI ID: WP_044762031.1
• Uniprot ID: -
• Organism: Streptococcus suis strain KKAHC02
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 116467..126874

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKWPP_RS00740 (ACKWPP_00740)	-	117868..118233 (+)	366	WP_409374001.1	DUF1033 family protein	-
ACKWPP_RS00745 (ACKWPP_00745)	-	118268..119218 (-)	951	WP_409374002.1	S66 peptidase family protein	-
ACKWPP_RS00750 (ACKWPP_00750)	comGA	119304..120254 (+)	951	WP_023369082.1	competence type IV pilus ATPase ComGA	Machinery gene
ACKWPP_RS00755 (ACKWPP_00755)	comGB	120166..121203 (+)	1038	WP_044680150.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACKWPP_RS00760 (ACKWPP_00760)	comGC	121205..121486 (+)	282	WP_044680148.1	competence type IV pilus major pilin ComGC	Machinery gene
ACKWPP_RS00765 (ACKWPP_00765)	comGD	121467..121874 (+)	408	WP_044762031.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACKWPP_RS00770 (ACKWPP_00770)	comGE	121846..122139 (+)	294	WP_024385126.1	competence type IV pilus minor pilin ComGE	Machinery gene
ACKWPP_RS00775 (ACKWPP_00775)	comGF/cglF	122126..122560 (+)	435	WP_074414675.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACKWPP_RS00780 (ACKWPP_00780)	comGG	122538..122948 (+)	411	WP_409374003.1	competence type IV pilus minor pilin ComGG	-
ACKWPP_RS00785 (ACKWPP_00785)	comGH	123005..123958 (+)	954	WP_002936545.1	class I SAM-dependent methyltransferase	Machinery gene
ACKWPP_RS00790 (ACKWPP_00790)	-	124008..125195 (+)	1188	WP_014637319.1	acetate kinase	-
ACKWPP_RS00795 (ACKWPP_00795)	-	125510..126061 (+)	552	WP_141587968.1	folate family ECF transporter S component	-

Sequence

Protein

• Length: 135 a.a.
• Molecular weight: 15377.51 Da
• Isoelectric Point: 9.3252

>NTDB_id=966814 ACKWPP_RS00765 WP_044762031.1 121467..121874(+) (comGD) [Streptococcus suis strain KKAHC02]
MLRRKNKAFTLFESLLTLFVVSFLAVSLSGTVQAAFQSVQEEIFLWEFEAIYKDSQKLAASSHQKVNLAIGGQEVTNGYQ
AVEVPRNVEVLEEKTIQFEENGGNSSLTKIRFRLSRRTVTYQLYIGSGRYKKTEE

Nucleotide

• Length: 408 bp

>NTDB_id=966814 ACKWPP_RS00765 WP_044762031.1 121467..121874(+) (comGD) [Streptococcus suis strain KKAHC02]
ATGCTACGGCGAAAAAATAAGGCTTTTACCCTGTTTGAAAGCCTGCTGACCTTGTTTGTTGTCAGTTTTTTAGCAGTTTC
TTTGTCGGGAACGGTGCAAGCAGCCTTTCAGTCAGTTCAAGAAGAGATTTTTCTCTGGGAATTTGAGGCCATCTATAAAG
ACAGTCAGAAATTGGCAGCCAGTTCCCACCAAAAAGTGAACCTTGCTATCGGTGGACAAGAAGTTACAAATGGTTATCAG
GCTGTAGAGGTGCCCAGAAACGTAGAGGTTTTAGAGGAGAAAACTATTCAGTTTGAAGAAAATGGTGGAAATTCTTCTCT
GACCAAGATTCGTTTTCGGCTTAGTCGAAGGACAGTCACGTATCAATTATATATAGGGAGTGGTCGCTATAAGAAAACAG
AAGAATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus gordonii str. Challis substr. CH1	48.819	94.074	0.459
comGD	Streptococcus mutans UA159	46.512	95.556	0.444
comGD	Streptococcus mutans UA140	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae Rx1	45.736	95.556	0.437
comGD/cglD	Streptococcus pneumoniae R6	45.736	95.556	0.437
comGD/cglD	Streptococcus pneumoniae D39	45.736	95.556	0.437
comGD/cglD	Streptococcus pneumoniae TIGR4	45.736	95.556	0.437
comGD/cglD	Streptococcus mitis SK321	44.961	95.556	0.43
comGD/cglD	Streptococcus mitis NCTC 12261	44.961	95.556	0.43
comGD	Lactococcus lactis subsp. cremoris KW2	38.281	94.815	0.363