Detailed information NTG0965998

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NST06_RS17310
• Genome accession: NZ_CP150197
• Coordinates: 3302335..3302991 (-)
• Length: 218 a.a.
• NCBI ID: WP_241218534.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL P4-0322
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3297335..3307991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NST06_RS17275 (NST06_17275)	fliW	3297473..3297907 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
NST06_RS17280 (NST06_17280)	-	3297936..3298514 (-)	579	WP_339240363.1	DUF6470 family protein	-
NST06_RS17285 (NST06_17285)	flgL	3298561..3299469 (-)	909	WP_024423617.1	flagellar hook-associated protein FlgL	-
NST06_RS17290 (NST06_17290)	flgK	3299479..3300999 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
NST06_RS17295 (NST06_17295)	-	3301015..3301497 (-)	483	WP_339240366.1	flagellar protein FlgN	-
NST06_RS17300 (NST06_17300)	flgM	3301516..3301779 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
NST06_RS17305 (NST06_17305)	-	3301859..3302278 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
NST06_RS17310 (NST06_17310)	comFC	3302335..3302991 (-)	657	WP_241218534.1	ComF family protein	Machinery gene
NST06_RS17315 (NST06_17315)	-	3303018..3303311 (-)	294	WP_025093967.1	competence protein ComFB	-
NST06_RS17320 (NST06_17320)	comFA	3303360..3304757 (-)	1398	WP_276507389.1	DEAD/DEAH box helicase	Machinery gene
NST06_RS17325 (NST06_17325)	-	3304878..3305720 (-)	843	WP_024423625.1	DegV family protein	-
NST06_RS17330 (NST06_17330)	degU	3305935..3306624 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NST06_RS17335 (NST06_17335)	degS	3306689..3307864 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24965.09 Da
• Isoelectric Point: 9.9287

>NTDB_id=965998 NST06_RS17310 WP_241218534.1 3302335..3302991(-) (comFC) [Bacillus sp. FSL P4-0322]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCNRWNERSDSIKILVKNRSVYTYNELMKDVLA
RFKFRGDTALAELFQKDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=965998 NST06_RS17310 WP_241218534.1 3302335..3302991(-) (comFC) [Bacillus sp. FSL P4-0322]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGCCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAGCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTGTGCCAGGACTGTAACAGATGGAATG
AACGCTCTGATTCTATTAAAATCCTTGTGAAAAATAGGTCAGTTTATACTTACAACGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTCAAAAAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATTCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATAAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-49)

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362