Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   NSU16_RS15590 Genome accession   NZ_CP150176
Coordinates   3038232..3039134 (-) Length   300 a.a.
NCBI ID   WP_168749496.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1003     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3033232..3044134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU16_RS15555 (NSU16_15555) - 3033476..3033952 (+) 477 WP_010331686.1 Na+/H+ antiporter subunit E -
  NSU16_RS15560 (NSU16_15560) - 3033952..3034236 (+) 285 WP_010331687.1 Na(+)/H(+) antiporter subunit F1 -
  NSU16_RS15565 (NSU16_15565) mnhG 3034220..3034594 (+) 375 WP_010331688.1 monovalent cation/H(+) antiporter subunit G -
  NSU16_RS15570 (NSU16_15570) - 3034633..3035013 (-) 381 WP_229149090.1 hotdog fold thioesterase -
  NSU16_RS15575 (NSU16_15575) comA 3035031..3035675 (-) 645 WP_010331690.1 two-component system response regulator ComA Regulator
  NSU16_RS15580 (NSU16_15580) comP 3035756..3038065 (-) 2310 WP_339192701.1 two-component system sensor histidine kinase ComP Regulator
  NSU16_RS15585 (NSU16_15585) comX 3038081..3038248 (-) 168 WP_044158946.1 competence pheromone ComX Regulator
  NSU16_RS15590 (NSU16_15590) comQ 3038232..3039134 (-) 903 WP_168749496.1 polyprenyl synthetase family protein Regulator
  NSU16_RS15595 (NSU16_15595) degQ 3039319..3039459 (-) 141 WP_010331694.1 degradation enzyme regulation protein DegQ Regulator
  NSU16_RS15600 (NSU16_15600) - 3039920..3040288 (+) 369 WP_268447270.1 hypothetical protein -
  NSU16_RS15605 (NSU16_15605) - 3040264..3041493 (-) 1230 WP_010331696.1 EAL and HDOD domain-containing protein -
  NSU16_RS15610 (NSU16_15610) - 3041629..3043098 (-) 1470 WP_010331697.1 nicotinate phosphoribosyltransferase -
  NSU16_RS15615 (NSU16_15615) - 3043114..3043665 (-) 552 WP_044158950.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 300 a.a.        Molecular weight: 34515.82 Da        Isoelectric Point: 6.6111

>NTDB_id=965028 NSU16_RS15590 WP_168749496.1 3038232..3039134(-) (comQ) [Bacillus sp. FSL K6-1003]
MKEIIKQYSFNEDLTQLLYSFIDSKEIFSFAESAILHYVVFGGKNLEVATKLGAGIEILILSSDIMDDLEDEDNHQALWM
KINRSESLNAALFLYTIGLTSIHSMDINPLIFKYVLKYVKEAMQGQHDDITNKSKTEDECLEVIRLKCGSLIALANVTGV
ILATDEYNEIVERYSYYKGIVAQISGDYHVLFSGNRSDIEKNKQTLIYLYLKRVFNEASKELLYLFSNKDLYHKALLNKD
KFAEKLIKAGVTQYVSVLLQLYKQKCISAIEQLNLYKEKKDLIKKHLLNYKKGDENARPN

Nucleotide


Download         Length: 903 bp        

>NTDB_id=965028 NSU16_RS15590 WP_168749496.1 3038232..3039134(-) (comQ) [Bacillus sp. FSL K6-1003]
ATGAAAGAAATTATAAAGCAATACAGTTTTAACGAAGATTTGACACAACTTCTTTACTCATTTATCGATTCTAAAGAAAT
ATTCTCCTTTGCTGAATCTGCAATTTTACATTATGTGGTTTTTGGAGGGAAGAATTTAGAGGTTGCAACAAAGCTCGGTG
CAGGAATAGAAATTCTTATTCTTTCATCAGATATCATGGATGATCTTGAAGATGAAGATAATCATCAGGCTTTATGGATG
AAAATTAATCGATCAGAATCCTTAAATGCTGCGCTTTTCTTATATACAATAGGATTAACAAGTATTCATTCCATGGATAT
CAATCCTTTGATTTTTAAATATGTTTTAAAATATGTGAAAGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CCAAAACAGAGGATGAGTGTTTAGAGGTAATTAGATTAAAATGTGGGAGCTTGATAGCATTAGCTAATGTAACAGGTGTT
ATATTAGCTACAGATGAATATAATGAAATAGTCGAAAGATACTCCTATTATAAGGGAATTGTAGCCCAAATTTCTGGAGA
CTATCATGTTCTTTTTTCTGGAAATCGCAGTGATATTGAAAAAAATAAACAAACATTGATTTATTTATATCTTAAACGTG
TATTTAATGAAGCTTCGAAAGAATTATTGTACTTATTTTCAAATAAGGATTTGTATCATAAGGCGTTATTAAATAAGGAT
AAATTCGCAGAAAAGTTAATTAAGGCAGGAGTTACCCAATACGTTTCAGTATTATTGCAGCTATATAAGCAAAAATGTAT
TTCTGCTATAGAACAATTAAATTTATATAAAGAGAAAAAAGATTTGATAAAGAAACACTTATTAAATTATAAAAAGGGTG
ATGAAAATGCAAGACCTAATTAA

Domains


Predicted by InterproScan.

(44-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

82.609

99.667

0.823


Multiple sequence alignment