Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NSU16_RS15580 Genome accession   NZ_CP150176
Coordinates   3035756..3038065 (-) Length   769 a.a.
NCBI ID   WP_339192701.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1003     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3030756..3043065
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU16_RS15540 (NSU16_15540) - 3031224..3031655 (+) 432 WP_339191425.1 Na(+)/H(+) antiporter subunit B -
  NSU16_RS15545 (NSU16_15545) - 3031655..3031996 (+) 342 WP_010331684.1 Na(+)/H(+) antiporter subunit C -
  NSU16_RS15550 (NSU16_15550) - 3031989..3033470 (+) 1482 WP_339191426.1 Na+/H+ antiporter subunit D -
  NSU16_RS15555 (NSU16_15555) - 3033476..3033952 (+) 477 WP_010331686.1 Na+/H+ antiporter subunit E -
  NSU16_RS15560 (NSU16_15560) - 3033952..3034236 (+) 285 WP_010331687.1 Na(+)/H(+) antiporter subunit F1 -
  NSU16_RS15565 (NSU16_15565) mnhG 3034220..3034594 (+) 375 WP_010331688.1 monovalent cation/H(+) antiporter subunit G -
  NSU16_RS15570 (NSU16_15570) - 3034633..3035013 (-) 381 WP_229149090.1 hotdog fold thioesterase -
  NSU16_RS15575 (NSU16_15575) comA 3035031..3035675 (-) 645 WP_010331690.1 two-component system response regulator ComA Regulator
  NSU16_RS15580 (NSU16_15580) comP 3035756..3038065 (-) 2310 WP_339192701.1 two-component system sensor histidine kinase ComP Regulator
  NSU16_RS15585 (NSU16_15585) comX 3038081..3038248 (-) 168 WP_044158946.1 competence pheromone ComX Regulator
  NSU16_RS15590 (NSU16_15590) comQ 3038232..3039134 (-) 903 WP_168749496.1 polyprenyl synthetase family protein Regulator
  NSU16_RS15595 (NSU16_15595) degQ 3039319..3039459 (-) 141 WP_010331694.1 degradation enzyme regulation protein DegQ Regulator
  NSU16_RS15600 (NSU16_15600) - 3039920..3040288 (+) 369 WP_268447270.1 hypothetical protein -
  NSU16_RS15605 (NSU16_15605) - 3040264..3041493 (-) 1230 WP_010331696.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89283.87 Da        Isoelectric Point: 8.6614

>NTDB_id=965026 NSU16_RS15580 WP_339192701.1 3035756..3038065(-) (comP) [Bacillus sp. FSL K6-1003]
MKNLIKKFTLTIIALSVLYICYITYISMNGIIIGTKVQKNHKNQFVIEEISESSYGQFVGLRTGDIILKINEEKPSTKHL
KWGYLSHINSLDILRYGKKIHLEDFDLVTLNRTYSFFLFVLPLVFYFLSIICIFYILKVSKVRKSFAGYILVLLLLDISI
AYISAGGPFRGHRINRYINLFTFISSPILYLQFIQGYLKEIGKTFLKRISALYVIPIFNIVIEFYRAYLQVDIDFLATVN
LVSFAALTLFAFVSIYFHLNKHKYAEHSFIIKLLILTNTLSFAPFLIFYVLPIILTGNYIFPALISASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYTLLAIIPTLLTVGALVWFDLVGIQMNPARQTVFIFVVMFSVFYFKEVIDFKFRLKRFSEKF
NYQDSIFKYTQLMRSVTSLQQVFKELKNTILDVLLVSKAYTFEIAPDHKVIYLDKQVKEPDWQLYEKEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMQIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDNNPCQEEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDG
VGFDQEKTNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=965026 NSU16_RS15580 WP_339192701.1 3035756..3038065(-) (comP) [Bacillus sp. FSL K6-1003]
TTGAAGAACTTAATAAAAAAATTCACATTAACCATAATTGCTTTGAGTGTTCTCTATATATGCTACATAACATATATCAG
TATGAATGGTATTATTATTGGTACTAAGGTTCAAAAAAATCATAAAAATCAATTTGTAATAGAAGAAATATCAGAGTCTT
CGTATGGACAATTTGTTGGTCTCAGAACGGGAGATATCATATTAAAAATTAATGAAGAAAAACCATCAACAAAGCATTTG
AAATGGGGATATTTGAGCCATATTAACAGTTTGGATATTTTAAGGTATGGAAAAAAGATTCATCTCGAAGATTTTGATTT
AGTTACTTTAAATAGAACTTATAGTTTCTTTTTGTTCGTACTTCCCTTGGTTTTTTATTTTTTAAGCATAATATGTATTT
TTTATATACTTAAGGTAAGTAAAGTAAGAAAGTCATTTGCTGGTTATATTCTTGTTTTGCTGTTATTAGACATTTCAATA
GCTTATATAAGTGCAGGTGGACCATTTAGAGGACATAGAATTAATAGGTATATAAACTTGTTTACTTTTATATCCTCTCC
TATTCTTTATCTTCAGTTTATACAAGGATATCTTAAAGAGATAGGAAAAACTTTTTTGAAAAGAATCTCGGCTCTTTATG
TAATCCCAATATTTAACATTGTGATTGAGTTTTATCGTGCCTATCTTCAAGTTGATATTGACTTTTTGGCGACTGTTAAT
TTGGTTTCTTTTGCGGCTTTAACTTTATTTGCTTTTGTATCGATATACTTCCATCTAAATAAACATAAATATGCTGAGCA
TTCGTTTATTATTAAATTATTAATTTTAACAAATACACTTTCATTTGCGCCATTTTTAATATTTTATGTTCTTCCGATTA
TACTTACAGGTAACTATATTTTCCCGGCGTTAATTTCAGCGTCATTGCTTGTACTTATTCCTTTCGGTTTAGTGTATCAG
TTTGTGGCTAATAAAATGTTTGATATAGAATTTATTTTAGGAAGGATGAGATATTATACTCTCCTTGCTATCATACCAAC
TCTACTTACAGTTGGAGCATTAGTTTGGTTTGATCTAGTGGGAATACAAATGAATCCTGCACGCCAAACTGTATTTATTT
TTGTTGTCATGTTCTCTGTCTTCTATTTCAAAGAGGTCATAGATTTTAAATTTCGATTAAAACGGTTTTCTGAAAAATTC
AACTATCAGGACAGTATTTTTAAATACACTCAGCTTATGAGAAGCGTAACTTCTCTTCAACAAGTCTTTAAAGAATTGAA
AAATACTATTTTGGATGTCCTGCTTGTAAGCAAGGCATATACCTTCGAAATTGCTCCTGATCACAAAGTGATATATCTAG
ATAAGCAAGTCAAGGAGCCGGATTGGCAACTATATGAAAAGGAATTTGAAAACGTAACTTCAGAAATCGGGAAAATTATC
GAAGTTAATCAGGGTTTTCTCATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTTTGCTTTGTTTATCTAATATTAA
CACTCCTCGGCTAACACGTGATGAAATATCATGGCTGAAGACACTTTCTTTTTACACGAGCGTGTCAATGGAAAATGTCA
TGCAGATTGAAGAACTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACAAACCCGATATGGCTGAAAAAGCTAATG
TTTGCGATCGAAGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCATTAAA
GCGCCAGTGTGAGCTGTTTTTGGCTGATTTTAAGAAGGATAATAATCCGTGTCAGGAAGAGGTGCAGGACAAGCTTGTAC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGAGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGAT
TTGGGACTGGTGAAGGCGTTGTCCAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGCTTAAATACCGG
CAGATTTACGGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCGAATGCAGTGA
AACACTCTCAGGCGACGGAAGTGCTTATTATGCTGATCAGCATTCAAAACAAAATTGTTCTCCATTATGAGGACGATGGT
GTGGGATTTGATCAAGAGAAAACCAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTT
AGATGGACGCCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

89.727

100

0.897


Multiple sequence alignment