Detailed information NTG0095629

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LGMS210922A_RS02290
• Genome accession: NZ_AP026069
• Coordinates: 470792..471796 (+)
• Length: 334 a.a.
• NCBI ID: WP_265150332.1
• Uniprot ID: A0AA43PE06
• Organism: Lactococcus garvieae strain MS210922A
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 465792..476796

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LGMS210922A_RS02270 (LGMS210922A_04410)	-	466181..466885 (+)	705	WP_004258993.1	Bax inhibitor-1/YccA family protein	-
LGMS210922A_RS02275 (LGMS210922A_04420)	-	466938..467762 (-)	825	WP_014024379.1	Cof-type HAD-IIB family hydrolase	-
LGMS210922A_RS02280 (LGMS210922A_04430)	-	468119..469540 (+)	1422	WP_014024380.1	NCS2 family permease	-
LGMS210922A_RS02285 (LGMS210922A_04440)	-	469617..470717 (+)	1101	WP_281162249.1	YdcF family protein	-
LGMS210922A_RS02290 (LGMS210922A_04450)	coiA	470792..471796 (+)	1005	WP_265150332.1	competence protein CoiA	Machinery gene
LGMS210922A_RS02295 (LGMS210922A_04460)	pepF	471780..473585 (+)	1806	WP_265150334.1	oligoendopeptidase F	Regulator
LGMS210922A_RS02300 (LGMS210922A_04470)	-	473585..474268 (+)	684	WP_004258974.1	O-methyltransferase	-
LGMS210922A_RS02305 (LGMS210922A_04480)	-	474366..475274 (+)	909	WP_265150336.1	peptidyl-prolyl cis-trans isomerase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 39861.65 Da
• Isoelectric Point: 7.7366

>NTDB_id=95629 LGMS210922A_RS02290 WP_265150332.1 470792..471796(+) (coiA) [Lactococcus garvieae strain MS210922A]
MLIALDKDGKTINLLDSTSINGPFYCPACKTSLRLKKGKIKIPHFAHVSLQNCDSWSENESAQHLGLKLSLYQWFKEKEK
VELEKYVPEIKQTADLLVNDKLAIEIQCSPLSLQRLEERTVSYKEMGYYVLWLQGRDLWLKNTLSSLQKNLLYYSAERGF
YFWELDWNRKKLRLKSLIYQDLKGRPIYLTEEFDFFQESLLDLLRQPFRKGKTLSLDVPKQEELQLFVQKQLYYQVPKWL
KVQEKYYEQGRNLLDLNWKKSYWSPPGLNLLTFDFADDTRESFFQVDISLEEYYHSFYESFQLQEHETLHTPSFYAIIKD
KNKVENGEWNGKKT

Nucleotide

• Length: 1005 bp

>NTDB_id=95629 LGMS210922A_RS02290 WP_265150332.1 470792..471796(+) (coiA) [Lactococcus garvieae strain MS210922A]
ATGTTAATAGCTTTGGATAAAGACGGAAAAACAATTAATCTTCTTGACAGCACTTCAATTAATGGCCCTTTTTATTGCCC
GGCCTGTAAGACGTCCCTTCGTTTAAAAAAAGGGAAGATAAAAATTCCTCACTTTGCCCATGTATCCTTACAAAATTGTG
ACTCTTGGAGTGAAAATGAATCTGCACAACACTTGGGCTTAAAACTCAGCTTATATCAGTGGTTTAAGGAAAAAGAGAAA
GTAGAGCTGGAAAAGTACGTGCCAGAGATTAAGCAAACGGCTGATTTGTTAGTGAATGATAAACTTGCTATTGAAATACA
GTGCTCACCCCTCTCTTTGCAACGCTTAGAAGAGAGAACGGTCAGTTACAAAGAAATGGGGTATTATGTACTTTGGCTTC
AAGGGAGGGACTTGTGGCTTAAAAATACGCTATCTTCTTTGCAGAAAAATTTGCTTTATTATTCAGCAGAGAGAGGTTTT
TATTTTTGGGAATTGGACTGGAACAGAAAGAAACTACGTTTGAAATCATTGATTTATCAAGATTTGAAAGGACGACCGAT
TTATCTAACGGAAGAGTTTGACTTCTTTCAAGAAAGTCTCTTAGACCTCTTACGACAGCCCTTTCGAAAAGGAAAAACTC
TGAGTTTAGATGTGCCAAAGCAAGAAGAGTTACAGTTGTTTGTTCAGAAACAATTATATTATCAAGTGCCAAAATGGCTT
AAAGTGCAAGAAAAATATTATGAACAAGGAAGAAATTTGCTGGACCTTAACTGGAAGAAGAGTTACTGGAGTCCTCCGGG
CTTGAACTTGTTGACCTTTGACTTTGCCGATGATACGCGAGAAAGCTTTTTTCAAGTAGACATTTCCTTGGAAGAATATT
ACCACAGCTTCTACGAAAGTTTTCAGTTACAAGAACATGAAACACTGCATACACCAAGCTTCTATGCTATAATTAAAGAT
AAAAATAAAGTGGAAAACGGAGAATGGAATGGCAAAAAAACGTGA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	51.84	97.605	0.506
coiA	Streptococcus pneumoniae Rx1	41.463	98.204	0.407
coiA	Streptococcus pneumoniae D39	41.463	98.204	0.407
coiA	Streptococcus pneumoniae R6	41.463	98.204	0.407
coiA	Streptococcus pneumoniae TIGR4	41.159	98.204	0.404
coiA	Streptococcus mitis NCTC 12261	40.854	98.204	0.401