Detailed information NTG0095387

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: QMM10_RS09545
• Genome accession: NZ_AP025938
• Coordinates: 1874368..1874829 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250545.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701057
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1869368..1879829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMM10_RS09510 (PC1044_18490)	-	1869679..1870503 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
QMM10_RS09515 (PC1044_18500)	rnpA	1870478..1870849 (-)	372	WP_000739246.1	ribonuclease P protein component	-
QMM10_RS09520	-	1870866..1870997 (-)	132	WP_000768904.1	hypothetical protein	-
QMM10_RS09525 (PC1044_18510)	-	1870998..1872188 (-)	1191	WP_000167766.1	acetate kinase	-
QMM10_RS09530 (PC1044_18520)	comYH	1872239..1873192 (-)	954	WP_000345119.1	class I SAM-dependent methyltransferase	Machinery gene
QMM10_RS09535 (PC1044_18530)	-	1873253..1873840 (-)	588	WP_000679774.1	class I SAM-dependent methyltransferase	-
QMM10_RS09540 (PC1044_18540)	comGG/cglG	1873977..1874390 (-)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
QMM10_RS09545	comGF/cglF	1874368..1874829 (-)	462	WP_000250545.1	competence type IV pilus minor pilin ComGF	Machinery gene
QMM10_RS09550 (PC1044_18560)	comGE/cglE	1874792..1875094 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
QMM10_RS09555 (PC1044_18570)	comGD/cglD	1875057..1875461 (-)	405	WP_000588005.1	competence type IV pilus minor pilin ComGD	Machinery gene
QMM10_RS09560 (PC1044_18580)	comGC/cglC	1875454..1875780 (-)	327	WP_000738638.1	comG operon protein ComGC	Machinery gene
QMM10_RS09565 (PC1044_18590)	comGB/cglB	1875782..1876798 (-)	1017	WP_078133850.1	competence type IV pilus assembly protein ComGB	Machinery gene
QMM10_RS09570 (PC1044_18600)	comGA/cglA/cilD	1876746..1877687 (-)	942	WP_000249550.1	competence type IV pilus ATPase ComGA	Machinery gene
QMM10_RS09575 (PC1044_18610)	-	1877763..1878128 (-)	366	WP_000286415.1	DUF1033 family protein	-
QMM10_RS09580 (PC1044_18620)	-	1878279..1879337 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17855.34 Da
• Isoelectric Point: 6.4832

>NTDB_id=95387 QMM10_RS09545 WP_000250545.1 1874368..1874829(-) (comGF/cglF) [Streptococcus pneumoniae strain PZ900701057]
MVQNSCWQSKSHKVKAFTLLESLLALLVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RFYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=95387 QMM10_RS09545 WP_000250545.1 1874368..1874829(-) (comGF/cglF) [Streptococcus pneumoniae strain PZ900701057]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTGCT
CGTCATCAGTGGAGGCTTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGATCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTGGAAGGCAAT
CGTTTCTATATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae D39	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae R6	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae TIGR4	93.464	100	0.935
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus mitis NCTC 12261	91.503	100	0.915