Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | AAA980_RS09365 | Genome accession | NZ_AP028604 |
| Coordinates | 1798424..1799383 (+) | Length | 319 a.a. |
| NCBI ID | WP_000777246.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain Pne3 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1793424..1804383
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAA980_RS09335 (TKY182805_18560) | - | 1793625..1794389 (-) | 765 | WP_000082879.1 | nuclear transport factor 2 family protein | - |
| AAA980_RS09340 (TKY182805_18570) | - | 1794393..1794836 (-) | 444 | WP_000655202.1 | MarR family transcriptional regulator | - |
| AAA980_RS09345 (TKY182805_18580) | - | 1795518..1795814 (-) | 297 | WP_000840137.1 | bacteriocin immunity protein | - |
| AAA980_RS09350 (TKY182805_18590) | pepA | 1795836..1796900 (-) | 1065 | WP_000209199.1 | glutamyl aminopeptidase | - |
| AAA980_RS09355 (TKY182805_18600) | - | 1797300..1798001 (+) | 702 | WP_000167835.1 | UDP-glucose 4-epimerase | - |
| AAA980_RS09360 | - | 1798017..1798127 (+) | 111 | WP_001108391.1 | hypothetical protein | - |
| AAA980_RS09365 (TKY182805_18610) | ceuB | 1798424..1799383 (+) | 960 | WP_000777246.1 | ABC transporter permease | Machinery gene |
| AAA980_RS09370 (TKY182805_18620) | - | 1799373..1800329 (+) | 957 | WP_001193668.1 | iron chelate uptake ABC transporter family permease subunit | - |
| AAA980_RS09375 (TKY182805_18630) | - | 1800326..1801078 (+) | 753 | WP_050201900.1 | ABC transporter ATP-binding protein | - |
| AAA980_RS09380 (TKY182805_18640) | - | 1801174..1802139 (+) | 966 | WP_000858260.1 | siderophore ABC transporter substrate-binding protein | - |
| AAA980_RS09385 (TKY182805_18650) | yidD | 1802364..1802606 (-) | 243 | WP_000821640.1 | membrane protein insertion efficiency factor YidD | - |
| AAA980_RS09390 (TKY182805_18660) | - | 1802606..1803328 (-) | 723 | WP_001222228.1 | pseudouridine synthase | - |
| AAA980_RS09395 (TKY182805_18670) | scpB | 1803315..1803884 (-) | 570 | WP_000105310.1 | SMC-Scp complex subunit ScpB | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 35365.25 Da Isoelectric Point: 9.2975
>NTDB_id=95392 AAA980_RS09365 WP_000777246.1 1798424..1799383(+) (ceuB) [Streptococcus pneumoniae strain Pne3]
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKCYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKCYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD
Nucleotide
Download Length: 960 bp
>NTDB_id=95392 AAA980_RS09365 WP_000777246.1 1798424..1799383(+) (ceuB) [Streptococcus pneumoniae strain Pne3]
ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGTGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA
ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGTGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
37.419 |
97.179 |
0.364 |