Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   QMM10_RS08855 Genome accession   NZ_AP025938
Coordinates   1750197..1751228 (-) Length   343 a.a.
NCBI ID   WP_000506427.1    Uniprot ID   A0A4J1PZQ1
Organism   Streptococcus pneumoniae strain PZ900701057     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1745197..1756228
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM10_RS08805 (PC1044_17240) - 1745291..1746052 (-) 762 Protein_1728 SDR family NAD(P)-dependent oxidoreductase -
  QMM10_RS08810 (PC1044_17250) ytpR 1746085..1746711 (-) 627 WP_000578309.1 YtpR family tRNA-binding protein -
  QMM10_RS08815 (PC1044_17260) - 1746727..1747044 (-) 318 WP_000615767.1 thioredoxin family protein -
  QMM10_RS08820 (PC1044_17270) - 1747041..1747340 (-) 300 WP_001013974.1 DUF4651 domain-containing protein -
  QMM10_RS08825 - 1747434..1747565 (+) 132 WP_050207302.1 hypothetical protein -
  QMM10_RS08830 (PC1044_17280) - 1747590..1747787 (-) 198 Protein_1733 N-acetylmuramoyl-L-alanine amidase family protein -
  QMM10_RS08835 (PC1044_17290) - 1748029..1748703 (-) 675 WP_000725750.1 membrane protein -
  QMM10_RS08840 (PC1044_17300) - 1748709..1749155 (-) 447 WP_000776589.1 LytTR family DNA-binding domain-containing protein -
  QMM10_RS08845 - 1749269..1749772 (-) 504 WP_000800942.1 phosphatase PAP2 family protein -
  QMM10_RS08850 (PC1044_17310) - 1749769..1750131 (-) 363 WP_000078804.1 DUF2200 family protein -
  QMM10_RS08855 (PC1044_17320) rcrQ 1750197..1751228 (-) 1032 WP_000506427.1 ATP-binding cassette domain-containing protein Regulator
  QMM10_RS08860 (PC1044_17330) rcrP 1751235..1752056 (-) 822 WP_000601678.1 ABC transporter permease Regulator
  QMM10_RS08865 (PC1044_17340) - 1752073..1752544 (-) 472 Protein_1740 MarR family winged helix-turn-helix transcriptional regulator -
  QMM10_RS08870 (PC1044_17350) - 1752668..1753378 (-) 711 WP_050072288.1 YebC/PmpR family DNA-binding transcriptional regulator -
  QMM10_RS08875 (PC1044_17360) ply 1754259..1755674 (-) 1416 WP_001284361.1 cholesterol-dependent cytolysin pneumolysin -
  QMM10_RS08880 (PC1044_17370) - 1755685..1756095 (-) 411 WP_000595758.1 hypothetical protein -

Sequence


Protein


Download         Length: 343 a.a.        Molecular weight: 38011.31 Da        Isoelectric Point: 4.4769

>NTDB_id=95374 QMM10_RS08855 WP_000506427.1 1750197..1751228(-) (rcrQ) [Streptococcus pneumoniae strain PZ900701057]
MGFLLMGALFIVLPRTMVSAKRINQVLDLHSSIQNPVQVQLTDENFKGQVEFKDVTFRYAANSEAVIEHVSFKAETGQTV
AFIGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSVTAHAGQRVAIVGPTGAGKTTIVNLLMKFYEIDKRSIRI
DGVDTKAMTRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQIGISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTLSVG
QKQLLTIACALLKDASLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSIIRNADLILVMKDGNIIEQGNYEE
LMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=95374 QMM10_RS08855 WP_000506427.1 1750197..1751228(-) (rcrQ) [Streptococcus pneumoniae strain PZ900701057]
ATGGGCTTCCTTCTCATGGGAGCACTCTTCATCGTTCTTCCCCGAACTATGGTCTCTGCTAAGCGGATTAATCAAGTTTT
AGATTTGCATTCTTCTATCCAAAACCCTGTTCAAGTGCAGCTGACTGATGAAAACTTCAAAGGTCAGGTCGAGTTTAAGG
ATGTGACCTTCCGCTATGCGGCAAATTCGGAGGCAGTTATTGAACATGTTAGCTTTAAAGCAGAAACTGGTCAAACAGTG
GCCTTTATTGGGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTGATTCCACGTTTCTACGACGTGTCAGCAGGAGA
AATTCTGGTGGACGGTGTCAATGTTCAAGACTATGACTTCTCTGTGACAGCTCATGCTGGTCAAAGGGTTGCCATTGTTG
GGCCGACTGGGGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAATTCTATGAGATTGATAAGAGAAGTATTCGCATT
GATGGTGTGGATACCAAGGCTATGACGCGTTCAGAAGTGCATGATGCCTTTTCAATGGTCTTGCAGGATACCTGGCTCTT
TGAAGGAACTATTCGAGACAATCTCATCTATAATCAAATAGGGATTAGTGATGAACGAATGATGGAAGCTAGTAAGGCTG
TGGGAATTCACCACTTTATTATGACCTTGCCAGATGGCTATGATACCATCTTGGATGACACCGTGACCTTGTCTGTAGGA
CAAAAACAACTATTGACTATTGCTTGTGCCCTTCTTAAGGATGCATCGCTTTTGATTTTGGATGAGGCGACTTCTTCTGT
TGACACACGGACAGAGGAATTGATCCAAAAAGCCATGGACCGTTTGATGGAAGGACGCACATCCTTTGTCATTGCCCACC
GCTTGTCAATCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATGGAAATATCATCGAGCAAGGCAACTATGAGGAA
CTGATGGCGCAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTTACAGAAGATGAAGCAGAAGAATAA

Domains


Predicted by InterproScan.

(68-117)

(120-265)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4J1PZQ1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

78.571

65.306

0.513

  rcrP Streptococcus mutans UA159

37.283

100

0.376


Multiple sequence alignment