Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ25_RS05620 | Genome accession | NZ_CP148254 |
| Coordinates | 1076656..1076958 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0004 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1071656..1081958
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ25_RS05595 (WHQ25_05595) | rpsR | 1072019..1072279 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHQ25_RS05600 (WHQ25_05600) | lon | 1072339..1074714 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHQ25_RS05605 (WHQ25_05605) | - | 1074731..1075378 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| WHQ25_RS05610 (WHQ25_05610) | fliW | 1075539..1075928 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ25_RS05615 (WHQ25_05615) | proC | 1075928..1076659 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ25_RS05620 (WHQ25_05620) | ctsT | 1076656..1076958 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ25_RS05625 (WHQ25_05625) | - | 1076955..1077618 (+) | 664 | Protein_1087 | hypothetical protein | - |
| WHQ25_RS05630 (WHQ25_05630) | - | 1077615..1078067 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ25_RS05635 (WHQ25_05635) | hemD | 1078064..1078693 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| WHQ25_RS05640 (WHQ25_05640) | thiE | 1078671..1079303 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ25_RS05645 (WHQ25_05645) | thiD | 1079293..1080105 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ25_RS05650 (WHQ25_05650) | - | 1080102..1080788 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ25_RS05655 (WHQ25_05655) | - | 1080785..1081546 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=953431 WHQ25_RS05620 WP_002853046.1 1076656..1076958(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0004]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=953431 WHQ25_RS05620 WP_002853046.1 1076656..1076958(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0004]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |