Detailed information NTG0953433

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: ACHZDB_RS08685
• Genome accession: NZ_CP172405
• Coordinates: 1918697..1921519 (+)
• Length: 940 a.a.
• NCBI ID: WP_399423773.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain LB503
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1913697..1926519

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHZDB_RS08665 (ACHZDB_08665)	csrD	1913790..1915799 (-)	2010	WP_005432793.1	RNase E specificity factor CsrD	-
ACHZDB_RS08670 (ACHZDB_08670)	ssb	1916047..1916583 (-)	537	WP_005432828.1	single-stranded DNA-binding protein	Machinery gene
ACHZDB_RS08675 (ACHZDB_08675)	qstR	1916877..1917521 (+)	645	WP_005432827.1	LuxR C-terminal-related transcriptional regulator	Regulator
ACHZDB_RS08680 (ACHZDB_08680)	galU	1917686..1918558 (+)	873	WP_005432802.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
ACHZDB_RS08685 (ACHZDB_08685)	uvrA	1918697..1921519 (+)	2823	WP_399423773.1	excinuclease ABC subunit UvrA	Machinery gene
ACHZDB_RS08690 (ACHZDB_08690)	-	1921587..1923371 (+)	1785	WP_399423775.1	PglL family O-oligosaccharyltransferase	-
ACHZDB_RS08695 (ACHZDB_08695)	-	1923428..1924549 (-)	1122	WP_029789691.1	alanine--glyoxylate aminotransferase family protein	-
ACHZDB_RS08700 (ACHZDB_08700)	lysC	1925075..1926427 (+)	1353	WP_045454900.1	lysine-sensitive aspartokinase 3	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103989.33 Da
• Isoelectric Point: 6.4221

>NTDB_id=953433 ACHZDB_RS08685 WP_399423773.1 1918697..1921519(+) (uvrA) [Vibrio campbellii strain LB503]
MDKIEVRGARTHNLKDINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHTPLAAQTISQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPPLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMEGD
GEEVIFSANFACPICGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDETLSLAQGAIRGWDQKNYYYFQML
TALADHYDFDIHAPFNSLPKKTQDIILKGSGRTEVEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALEFFHTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDTKKTVELLGATGNNLKNVDLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKAIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=953433 ACHZDB_RS08685 WP_399423773.1 1918697..1921519(+) (uvrA) [Vibrio campbellii strain LB503]
ATGGATAAAATAGAAGTTCGTGGTGCCCGCACCCATAACCTCAAAGACATCAACCTCACTATCCCCCGCGATAAACTGAT
TGTCATTACTGGTTTGAGTGGTTCTGGTAAATCCTCTCTCGCATTCGATACTTTGTACGCTGAAGGTCAAAGACGTTACG
TAGAGTCACTATCAGCTTACGCGCGCCAATTTTTGTCTCTTATGGAAAAGCCAGATGTTGACCACATCGAAGGTTTGTCT
CCTGCGATCTCGATTGAGCAGAAATCAACATCACACAACCCACGTTCTACCGTCGGTACCATTACCGAGGTATACGATTA
CCTGCGTCTACTTTACGCTCGCGTTGGTGAGCCTCGTTGTCCGACGCACCATACGCCTCTAGCCGCTCAAACCATCAGCC
AGATGGTAGATAAAGTCTTAGAGTTGCCAGAAGGCAGCAAAATGATGCTGCTTGCGCCTATTGTGAAAGAACGTAAAGGT
GAACATGTTAAGACTCTAGAGAACCTCGCTGCTCAAGGTTTCATCCGCGCACGCATCGATGGTGAAACTTGCGATCTTTC
TGATCCACCACCACTAGAACTGCACAAGAAACACACTATTGAAGTGGTTGTAGACCGCTTTAAAGTCCGCCCGGATTTGC
AGCAACGTTTGGCTGAATCATTCGAAACCACACTAGAGCTATCTGGTGGTATCGCTGTTGTTGCTCCAATGGAAGGCGAT
GGCGAAGAGGTGATCTTCTCAGCTAACTTTGCTTGCCCTATTTGTGGCTACAGCATGCAAGAACTTGAGCCTCGTTTGTT
CTCATTCAACAACCCAGCAGGTGCGTGTGGCACTTGTGATGGTTTAGGTGTGCAGCAATATTTCGACCCAAGCCGAGTTA
TTCAAGATGAAACTCTGAGTTTGGCACAAGGTGCGATTCGAGGTTGGGATCAAAAGAACTACTATTATTTCCAGATGCTG
ACTGCGCTGGCGGATCATTACGACTTCGATATTCACGCACCATTTAACTCTCTACCAAAGAAAACCCAAGACATCATTCT
TAAAGGATCGGGGCGTACTGAAGTAGAGTTCAAGTACATTAACGATCGTGGTGACATTCGCGTTAAGCGCCATCCTTTTG
AAGGGATCCTGAACACACTTGAACGCCGTTACCGCGATACTGAATCTAACTCGGTACGTGAAGAGCTTGCGAAATACATC
TCTACTAAGTCTTGCTCAAGCTGTGGTGGTACTCGTCTACGCCTTGAAGCTCGTAACGTTTTTATCGCCGATACGACACT
ACCGGAGATTGTTGAACTCAGCATCGCCGACGCATTGGAATTCTTCCACACTTTGAAGCTCGAAGGCCAACGCGCCCAAA
TCGCTGAAAAAGTGATGAAGGAAATCAACGACCGCCTGCAATTCTTGGTTAACGTTGGTTTGAACTACCTCAACTTATCA
CGTAGCGCGGAAACCTTATCAGGCGGTGAGGCTCAACGTATTCGTTTAGCAAGCCAAATTGGTGCGGGTCTAGTCGGTGT
TATGTACGTACTGGATGAGCCATCAATTGGTCTCCACCAGCGTGATAACGAACGTCTATTGAAAACTCTGACCCACCTAA
GAGATTTAGGTAACACGGTATTAGTGGTTGAGCACGATGAAGATGCGATTCGTTGTGCTGATCACGTGATCGATATCGGT
CCAGGTGCCGGTGTACACGGCGGTAACGTGGTCGCTGAAGGTACGATGGACGAGATCATTGCCAATCCGAACTCACTGAC
TGGTCAGTACCTCAGTGGCGCGAAAGAGATTGCGGTACCAAAAGAGCGTACACCACGCGATACAAAGAAAACCGTTGAAT
TACTTGGCGCGACAGGTAACAACTTAAAGAATGTCGACCTTTCCGTTCCTGTTGGCTTGTTCAGCTGTATTACCGGTGTA
TCCGGCTCAGGTAAGTCGACTCTGATCAACGATACCTTCTTTAAGATTGCTCATACCCAGTTGAACGGCGCAACAACGGC
GCACCCTTCACCATACAAAGCGATCAAAGGGTTAGAGCACTTCGATAAAGTGATCGACATTGACCAAAGTCCTATCGGTC
GTACGCCACGTTCCAACCCAGCCACTTACACGGGAATCTTTACTCCGATTCGTGAACTGTTTGCTGGCACGCAAGAGTCG
CGCTCTCGCGGTTACAAACCGGGGCGCTTTAGCTTTAACGTACGCGGAGGTCGCTGTGAAGCGTGTCAGGGTGATGGCGT
AATCAAGGTGGAAATGCACTTCTTACCTGACGTTTACGTTCCTTGTGATGTGTGTAAAGGTAAACGCTACAACCGCGAAA
CACTTGAAGTACGTTACAAAGGCAAGACCATTGATGAAGTACTGGAAATGACGGTAGAAGATGCACGTACTTTCTTCGAT
CCAGTACCAGCGATTGCTCGTAAGCTGCAAACTCTGATGGATGTAGGTTTGTCTTACATTCGCTTAGGTCAAGCGGCAAC
TACGCTGTCAGGTGGTGAAGCTCAGCGTGTAAAACTGGCTCGAGAGCTGTCTAAGCGTGATACAGGTAAAACCTTATACA
TTTTGGATGAGCCGACAACAGGTCTGCACTTCCACGATATCCAGCAGCTACTAACTGTACTGCACCGTCTGCGCGACCAC
GGAAATACCGTTGTCGTCATCGAGCATAACCTCGATGTCATTAAGACGGCAGACTGGATTATCGACTTAGGCCCTGAAGG
TGGACAAGGTGGTGGTGAGATCATTGCACAAGGAACCCCTGAAGATGTGTCTCAGATCGAAGGTTCACACACAGCTCGCT
TCCTTAAGCCTATGTTGAAGTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA interaction domain (UvrA_inter) (130-236)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.431	100	0.576
uvrA	Streptococcus pneumoniae TIGR4	57.431	100	0.576
uvrA	Streptococcus pneumoniae D39	57.431	100	0.576