Detailed information NTG0948885

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ACG3JE_RS10120
• Genome accession: NZ_CP171736
• Coordinates: 1985090..1986007 (+)
• Length: 305 a.a.
• NCBI ID: WP_013793590.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain DB-M17
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1980090..1991007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JE_RS10100 (ACG3JE_10100)	purE	1981544..1982032 (+)	489	WP_003107462.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
ACG3JE_RS10105 (ACG3JE_10105)	purK	1982019..1983110 (+)	1092	WP_013793587.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
ACG3JE_RS10110 (ACG3JE_10110)	-	1983239..1983466 (+)	228	WP_013793588.1	hypothetical protein	-
ACG3JE_RS10115 (ACG3JE_10115)	purB	1983681..1984973 (+)	1293	WP_013793589.1	adenylosuccinate lyase	-
ACG3JE_RS10120 (ACG3JE_10120)	comR	1985090..1986007 (+)	918	WP_013793590.1	helix-turn-helix transcriptional regulator	Regulator
ACG3JE_RS10125 (ACG3JE_10125)	-	1986073..1986171 (+)	99	WP_202951667.1	quorum-sensing system DWW-type pheromone	-
ACG3JE_RS10130 (ACG3JE_10130)	ruvB	1986306..1987304 (+)	999	WP_013793591.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ACG3JE_RS10135 (ACG3JE_10135)	-	1987528..1987956 (+)	429	WP_003107455.1	low molecular weight protein-tyrosine-phosphatase	-
ACG3JE_RS10140 (ACG3JE_10140)	-	1987985..1988386 (+)	402	WP_003105881.1	membrane protein	-
ACG3JE_RS10145 (ACG3JE_10145)	-	1988383..1990161 (+)	1779	WP_003107454.1	acyltransferase family protein	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 35780.86 Da
• Isoelectric Point: 9.0707

>NTDB_id=948885 ACG3JE_RS10120 WP_013793590.1 1985090..1986007(+) (comR) [Streptococcus parauberis strain DB-M17]
MPELGDKIKAIRLGKKLTRESICGDETELSVRQLVRIEQNQSLPTLAKLVYLAKVLDIRLDKLINPKTISIPHDYLALKY
QIIRTPLYMNDQVMAIREGQFDAIFEKYYDYLPDEEKLIIDFLQSKFDVYQSGDANFGRPLLQDYIRQISKKKRYQINDI
FLIDLYLTCAIVSSFKAEFFDLDLYRRFLSKLLLMEKTLALSDLFLLNNVLLTCIDVGIRIGHFELIQPALKASHRIMYK
VQDFQRLPIYCMHAWKNALFYTKSVKRGEDYFHQAQLFAKLIGDKNLEGKLAREWQKNLAESEKT

Nucleotide

• Length: 918 bp

>NTDB_id=948885 ACG3JE_RS10120 WP_013793590.1 1985090..1986007(+) (comR) [Streptococcus parauberis strain DB-M17]
ATGCCAGAGCTCGGGGATAAAATCAAAGCTATTCGACTGGGAAAAAAGTTAACTAGAGAGTCTATTTGCGGTGATGAGAC
AGAATTGTCTGTGCGTCAATTGGTACGAATTGAGCAAAATCAATCTCTGCCTACTCTTGCAAAATTAGTTTATCTTGCTA
AAGTTCTAGATATTAGACTTGATAAGTTAATTAACCCAAAAACAATTTCAATCCCACATGATTATCTTGCCCTTAAATAT
CAAATTATCCGGACACCGTTGTATATGAATGATCAAGTTATGGCAATTAGAGAAGGGCAGTTTGATGCTATTTTTGAAAA
GTACTATGACTATTTGCCAGATGAAGAAAAACTCATTATTGATTTTTTACAATCTAAATTTGATGTCTATCAAAGTGGAG
ATGCAAATTTTGGCCGTCCCCTCTTACAAGATTACATCAGACAAATCAGTAAGAAAAAACGCTATCAAATTAATGATATC
TTCTTAATTGATCTCTATTTAACCTGTGCGATTGTCAGTTCTTTTAAAGCTGAGTTTTTTGACTTGGACCTTTATCGTCG
CTTTCTGTCCAAGTTATTGTTAATGGAGAAGACATTAGCCTTAAGTGATTTATTCTTACTTAATAATGTCCTTTTAACCT
GTATTGATGTTGGTATTAGGATAGGTCATTTTGAACTCATTCAACCGGCTTTAAAGGCAAGTCATCGCATTATGTACAAG
GTTCAAGATTTCCAACGCCTGCCAATTTACTGCATGCATGCCTGGAAAAATGCTCTTTTTTATACTAAGTCTGTAAAAAG
AGGAGAGGATTACTTTCATCAGGCGCAGCTATTTGCCAAATTGATTGGTGATAAAAATTTGGAAGGGAAATTAGCTCGTG
AATGGCAAAAAAATTTGGCAGAAAGTGAAAAAACATGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (72-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus pyogenes MGAS315	45.819	98.033	0.449
comR	Streptococcus mutans UA159	42.617	97.705	0.416
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	43.902	94.098	0.413
comR	Streptococcus pyogenes MGAS8232	39.799	98.033	0.39
comR	Streptococcus suis P1/7	37.374	97.377	0.364
comR	Streptococcus suis 05ZYH33	37.374	97.377	0.364