Detailed information NTG0948779

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ACG3JM_RS08630
• Genome accession: NZ_CP171735
• Coordinates: 1716676..1717593 (+)
• Length: 305 a.a.
• NCBI ID: WP_013793590.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain DB-M11
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1711676..1722593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JM_RS08610 (ACG3JM_08610)	purE	1713130..1713618 (+)	489	WP_003107462.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
ACG3JM_RS08615 (ACG3JM_08615)	purK	1713605..1714696 (+)	1092	WP_013793587.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
ACG3JM_RS08620 (ACG3JM_08620)	-	1714825..1715052 (+)	228	WP_013793588.1	hypothetical protein	-
ACG3JM_RS08625 (ACG3JM_08625)	purB	1715267..1716559 (+)	1293	WP_013793589.1	adenylosuccinate lyase	-
ACG3JM_RS08630 (ACG3JM_08630)	comR	1716676..1717593 (+)	918	WP_013793590.1	helix-turn-helix transcriptional regulator	Regulator
ACG3JM_RS08635 (ACG3JM_08635)	-	1717659..1717757 (+)	99	WP_202951667.1	quorum-sensing system DWW-type pheromone	-
ACG3JM_RS08640 (ACG3JM_08640)	ruvB	1717892..1718890 (+)	999	WP_013793591.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ACG3JM_RS08645 (ACG3JM_08645)	-	1719114..1719542 (+)	429	WP_003107455.1	low molecular weight protein-tyrosine-phosphatase	-
ACG3JM_RS08650 (ACG3JM_08650)	-	1719571..1719972 (+)	402	WP_003105881.1	membrane protein	-
ACG3JM_RS08655 (ACG3JM_08655)	-	1719969..1721747 (+)	1779	WP_003107454.1	acyltransferase family protein	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 35780.86 Da
• Isoelectric Point: 9.0707

>NTDB_id=948779 ACG3JM_RS08630 WP_013793590.1 1716676..1717593(+) (comR) [Streptococcus parauberis strain DB-M11]
MPELGDKIKAIRLGKKLTRESICGDETELSVRQLVRIEQNQSLPTLAKLVYLAKVLDIRLDKLINPKTISIPHDYLALKY
QIIRTPLYMNDQVMAIREGQFDAIFEKYYDYLPDEEKLIIDFLQSKFDVYQSGDANFGRPLLQDYIRQISKKKRYQINDI
FLIDLYLTCAIVSSFKAEFFDLDLYRRFLSKLLLMEKTLALSDLFLLNNVLLTCIDVGIRIGHFELIQPALKASHRIMYK
VQDFQRLPIYCMHAWKNALFYTKSVKRGEDYFHQAQLFAKLIGDKNLEGKLAREWQKNLAESEKT

Nucleotide

• Length: 918 bp

>NTDB_id=948779 ACG3JM_RS08630 WP_013793590.1 1716676..1717593(+) (comR) [Streptococcus parauberis strain DB-M11]
ATGCCAGAGCTCGGGGATAAAATCAAAGCTATTCGACTGGGAAAAAAGTTAACTAGAGAGTCTATTTGCGGTGATGAGAC
AGAATTGTCTGTGCGTCAATTGGTACGAATTGAGCAAAATCAATCTCTGCCTACTCTTGCAAAATTAGTTTATCTTGCTA
AAGTTCTAGATATTAGACTTGATAAGTTAATTAACCCAAAAACAATTTCAATCCCACATGATTATCTTGCCCTTAAATAT
CAAATTATCCGGACACCGTTGTATATGAATGATCAAGTTATGGCAATTAGAGAAGGGCAGTTTGATGCTATTTTTGAAAA
GTACTATGACTATTTGCCAGATGAAGAAAAACTCATTATTGATTTTTTACAATCTAAATTTGATGTCTATCAAAGTGGAG
ATGCAAATTTTGGCCGTCCCCTCTTACAAGATTACATCAGACAAATCAGTAAGAAAAAACGCTATCAAATTAATGATATC
TTCTTAATTGATCTCTATTTAACCTGTGCGATTGTCAGTTCTTTTAAAGCTGAGTTTTTTGACTTGGACCTTTATCGTCG
CTTTCTGTCCAAGTTATTGTTAATGGAGAAGACATTAGCCTTAAGTGATTTATTCTTACTTAATAATGTCCTTTTAACCT
GTATTGATGTTGGTATTAGGATAGGTCATTTTGAACTCATTCAACCGGCTTTAAAGGCAAGTCATCGCATTATGTACAAG
GTTCAAGATTTCCAACGCCTGCCAATTTACTGCATGCATGCCTGGAAAAATGCTCTTTTTTATACTAAGTCTGTAAAAAG
AGGAGAGGATTACTTTCATCAGGCGCAGCTATTTGCCAAATTGATTGGTGATAAAAATTTGGAAGGGAAATTAGCTCGTG
AATGGCAAAAAAATTTGGCAGAAAGTGAAAAAACATGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (72-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus pyogenes MGAS315	45.819	98.033	0.449
comR	Streptococcus mutans UA159	42.617	97.705	0.416
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	43.902	94.098	0.413
comR	Streptococcus pyogenes MGAS8232	39.799	98.033	0.39
comR	Streptococcus suis P1/7	37.374	97.377	0.364
comR	Streptococcus suis 05ZYH33	37.374	97.377	0.364