Detailed information NTG0948459

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ACG3JF_RS06755
• Genome accession: NZ_CP171732
• Coordinates: 1362348..1363265 (+)
• Length: 305 a.a.
• NCBI ID: WP_013793590.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain DB-M3
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1357348..1368265

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JF_RS06735 (ACG3JF_06735)	purE	1358801..1359289 (+)	489	WP_003107462.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
ACG3JF_RS06740 (ACG3JF_06740)	purK	1359276..1360367 (+)	1092	WP_013793587.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
ACG3JF_RS06745 (ACG3JF_06745)	-	1360496..1360723 (+)	228	WP_013793588.1	hypothetical protein	-
ACG3JF_RS06750 (ACG3JF_06750)	purB	1360939..1362231 (+)	1293	WP_013793589.1	adenylosuccinate lyase	-
ACG3JF_RS06755 (ACG3JF_06755)	comR	1362348..1363265 (+)	918	WP_013793590.1	helix-turn-helix transcriptional regulator	Regulator
ACG3JF_RS06760 (ACG3JF_06760)	-	1363331..1363429 (+)	99	WP_202951667.1	quorum-sensing system DWW-type pheromone	-
ACG3JF_RS06765 (ACG3JF_06765)	ruvB	1363564..1364562 (+)	999	WP_013793591.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ACG3JF_RS06770 (ACG3JF_06770)	-	1364786..1365214 (+)	429	WP_003107455.1	low molecular weight protein-tyrosine-phosphatase	-
ACG3JF_RS06775 (ACG3JF_06775)	-	1365243..1365644 (+)	402	WP_003105881.1	membrane protein	-
ACG3JF_RS06780 (ACG3JF_06780)	-	1365641..1367419 (+)	1779	WP_003107454.1	acyltransferase family protein	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 35780.86 Da
• Isoelectric Point: 9.0707

>NTDB_id=948459 ACG3JF_RS06755 WP_013793590.1 1362348..1363265(+) (comR) [Streptococcus parauberis strain DB-M3]
MPELGDKIKAIRLGKKLTRESICGDETELSVRQLVRIEQNQSLPTLAKLVYLAKVLDIRLDKLINPKTISIPHDYLALKY
QIIRTPLYMNDQVMAIREGQFDAIFEKYYDYLPDEEKLIIDFLQSKFDVYQSGDANFGRPLLQDYIRQISKKKRYQINDI
FLIDLYLTCAIVSSFKAEFFDLDLYRRFLSKLLLMEKTLALSDLFLLNNVLLTCIDVGIRIGHFELIQPALKASHRIMYK
VQDFQRLPIYCMHAWKNALFYTKSVKRGEDYFHQAQLFAKLIGDKNLEGKLAREWQKNLAESEKT

Nucleotide

• Length: 918 bp

>NTDB_id=948459 ACG3JF_RS06755 WP_013793590.1 1362348..1363265(+) (comR) [Streptococcus parauberis strain DB-M3]
ATGCCAGAGCTCGGGGATAAAATCAAAGCTATTCGACTGGGAAAAAAGTTAACTAGAGAGTCTATTTGCGGTGATGAGAC
AGAATTGTCTGTGCGTCAATTGGTACGAATTGAGCAAAATCAATCTCTGCCTACTCTTGCAAAATTAGTTTATCTTGCTA
AAGTTCTAGATATTAGACTTGATAAGTTAATTAACCCAAAAACAATTTCAATCCCACATGATTATCTTGCCCTTAAATAT
CAAATTATCCGGACACCGTTGTATATGAATGATCAAGTTATGGCAATTAGAGAAGGGCAGTTTGATGCTATTTTTGAAAA
GTACTATGACTATTTGCCAGATGAAGAAAAACTCATTATTGATTTTTTACAATCTAAATTTGATGTCTATCAAAGTGGAG
ATGCAAATTTTGGCCGTCCCCTCTTACAAGATTACATCAGACAAATCAGTAAGAAAAAACGCTATCAAATTAATGATATC
TTCTTAATTGATCTCTATTTAACCTGTGCGATTGTCAGTTCTTTTAAAGCTGAGTTTTTTGACTTGGACCTTTATCGTCG
CTTTCTGTCCAAGTTATTGTTAATGGAGAAGACATTAGCCTTAAGTGATTTATTCTTACTTAATAATGTCCTTTTAACCT
GTATTGATGTTGGTATTAGGATAGGTCATTTTGAACTCATTCAACCGGCTTTAAAGGCAAGTCATCGCATTATGTACAAG
GTTCAAGATTTCCAACGCCTGCCAATTTACTGCATGCATGCCTGGAAAAATGCTCTTTTTTATACTAAGTCTGTAAAAAG
AGGAGAGGATTACTTTCATCAGGCGCAGCTATTTGCCAAATTGATTGGTGATAAAAATTTGGAAGGGAAATTAGCTCGTG
AATGGCAAAAAAATTTGGCAGAAAGTGAAAAAACATGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (72-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus pyogenes MGAS315	45.819	98.033	0.449
comR	Streptococcus mutans UA159	42.617	97.705	0.416
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	43.902	94.098	0.413
comR	Streptococcus pyogenes MGAS8232	39.799	98.033	0.39
comR	Streptococcus suis P1/7	37.374	97.377	0.364
comR	Streptococcus suis 05ZYH33	37.374	97.377	0.364