Detailed information NTG0944772

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: V9T32_RS13400
• Genome accession: NZ_CP146865
• Coordinates: 2840036..2842150 (-)
• Length: 704 a.a.
• NCBI ID: WP_338714391.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain DS1902
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 2835036..2847150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9T32_RS13370	-	2835251..2835454 (-)	204	WP_027821496.1	hypothetical protein	-
V9T32_RS13375	-	2835592..2836191 (-)	600	WP_226319714.1	CPBP family intramembrane glutamic endopeptidase	-
V9T32_RS13380	-	2836362..2837042 (-)	681	WP_003641991.1	CPBP family intramembrane glutamic endopeptidase	-
V9T32_RS13385	-	2837129..2837797 (-)	669	WP_063204066.1	CPBP family intramembrane glutamic endopeptidase	-
V9T32_RS13390	-	2837865..2838554 (-)	690	WP_063204065.1	CPBP family intramembrane glutamic endopeptidase	-
V9T32_RS13395	-	2838644..2840020 (-)	1377	WP_338714390.1	HlyD family secretion protein	-
V9T32_RS13400	comA	2840036..2842150 (-)	2115	WP_338714391.1	peptide cleavage/export ABC transporter	Regulator
V9T32_RS13405	plnE	2842453..2842623 (+)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
V9T32_RS13410	plnF	2842648..2842806 (+)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
V9T32_RS13415	-	2842905..2843678 (+)	774	WP_015825123.1	CPBP family intramembrane glutamic endopeptidase	-
V9T32_RS13420	-	2843984..2844727 (-)	744	WP_063204018.1	response regulator transcription factor	-
V9T32_RS13425	-	2844846..2845589 (-)	744	WP_118130877.1	response regulator transcription factor	-
V9T32_RS13430	-	2845590..2846762 (-)	1173	WP_338714392.1	GHKL domain-containing protein	-

Sequence

Protein

• Length: 704 a.a.
• Molecular weight: 78507.09 Da
• Isoelectric Point: 6.9428

>NTDB_id=944772 V9T32_RS13400 WP_338714391.1 2840036..2842150(-) (comA) [Lactiplantibacillus plantarum strain DS1902]
MDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFDVQDLPLPFIVHVTKNRDL
QHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLLKQRRLVINIVLA
AVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEIILGYIRHVFELPM
SFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVILAFNKSFERLNQ
KEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVLEVVVLWVGANLV
IHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNGDIKLQGVSYRYG
YGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLINFYQPNSGDVILNGFNVKNIDKHTLRTHINYIPQEPYIFSATI
EENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQVLIFDESTSGLDA
ITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2115 bp

>NTDB_id=944772 V9T32_RS13400 WP_338714391.1 2840036..2842150(-) (comA) [Lactiplantibacillus plantarum strain DS1902]
ATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTATGGTTCGACAACATCATTGGCCTATCTAAGAAATAT
TGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAAAAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAA
TTCAAGCAGATATGAGTCTTTTCGATGTCCAAGATTTACCATTGCCATTCATTGTGCATGTTACCAAAAATAGGGATCTA
CAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACGCATGTCGTGATTGCTGATCCGGACCCAACAGTTGCGGTTATCAG
TATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCCTTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTA
AGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTAAAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCT
GCAGTTTTAATCACGATTATTAGTATTTGTGGGTCGTATTTCTTACAAGCGGTGATTGATACTTATATTCCTAATAATAT
GCACAGTACATTGGCAGTGGTGGCAATTGGTCTAATCGTTTTTTATACCTTTCAGGCCATCTTTACTTATGCCCAGAATT
TTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATTTTAGGCTATATTCGGCACGTCTTTGAATTGCCAATG
AGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCAAGGTTTACGGATGCCAGTAAGATTATTGATGCGTTAGCTAG
CACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTATGGGGGCAATCTTGGTAATCCAGAATATGACACTTT
TTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATCTTAGCCTTTAATAAATCCTTTGAACGATTGAATCAA
AAGGAAATGGAAAGCAATGCTATTTTGAGTTCAGCCATTATTGAGGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAA
TGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTGATTATCTACGTAAGAGTTTAGCCTATCTTAAAGCGG
ATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTAGAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTC
ATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGCTTTATTAGCCTATTTTGTTAATCCACTACAGAATAT
TATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACAACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAAT
TTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGTGATATTAAGTTACAAGGGGTCAGCTATCGTTATGGT
TACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACAACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTC
TGGCAAGTCCACGTTAGTTAAATTGCTTATTAATTTTTATCAACCAAATAGTGGTGATGTCATATTGAATGGCTTCAACG
TTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTACATCCCGCAGGAACCATACATCTTTTCAGCGACCATT
GAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAAAGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGA
TACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAGATGAGAATGGTAATACACTATCAGGTGGTCAGCGAC
AACGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTCTTGATATTTGATGAGTCGACGAGTGGACTGGATGCA
ATTACTGAAAAACAATTAATTGATAATTTAGTGGCAATGACTGACAAGACGATTATTTTTATTGCCCACCGGTTGTCGAT
TGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGGTCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATG
AACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (154-424)

• Peptidase C39 family (Peptidase_C39) (1-128)

• ABC transporter (ABC_tran) (486-636)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	59.091	100	0.591
comA	Streptococcus pneumoniae Rx1	58.807	100	0.588
comA	Streptococcus pneumoniae D39	58.807	100	0.588
comA	Streptococcus pneumoniae R6	58.807	100	0.588
comA	Streptococcus pneumoniae TIGR4	58.665	100	0.587
comA	Streptococcus mitis SK321	58.523	100	0.585
comA	Streptococcus gordonii str. Challis substr. CH1	57.326	99.858	0.572
comA/nlmT	Streptococcus mutans UA159	55.413	99.716	0.553