Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8952_RS03115 | Genome accession | NZ_AP028396 |
| Coordinates | 604685..605068 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-11505 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 599685..610068
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8952_RS03095 (B11505_06110) | - | 599764..601698 (-) | 1935 | WP_100620187.1 | RNB domain-containing ribonuclease | - |
| R8952_RS03100 (B11505_06120) | ilvC | 601817..602839 (+) | 1023 | WP_002858483.1 | ketol-acid reductoisomerase | - |
| R8952_RS03105 (B11505_06130) | - | 602843..603925 (+) | 1083 | WP_002859983.1 | divergent polysaccharide deacetylase family protein | - |
| R8952_RS03110 (B11505_06140) | dprA | 603915..604688 (+) | 774 | WP_002859984.1 | DNA-processing protein DprA | Machinery gene |
| R8952_RS03115 (B11505_06150) | dprB | 604685..605068 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8952_RS03120 (B11505_06160) | - | 605097..605936 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8952_RS03125 (B11505_06170) | msrA | 606112..606609 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8952_RS03130 (B11505_06180) | ppa | 606651..607169 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| R8952_RS03135 (B11505_06190) | adk | 607179..607757 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8952_RS03140 (B11505_06200) | aspS | 607754..609505 (-) | 1752 | WP_100620190.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=94411 R8952_RS03115 WP_002852281.1 604685..605068(+) (dprB) [Campylobacter jejuni strain BCH-11505]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=94411 R8952_RS03115 WP_002852281.1 604685..605068(+) (dprB) [Campylobacter jejuni strain BCH-11505]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |