Detailed information NTG0943853

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: RdKW20_RS08495
• Genome accession: NZ_CP146693
• Coordinates: 1703315..1704844 (+)
• Length: 509 a.a.
• NCBI ID: WP_005693440.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain Rd-KW20
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 1698315..1709844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RdKW20_RS08470 (RdKW20_001602)	oppC	1698661..1699596 (+)	936	WP_005651799.1	oligopeptide ABC transporter permease OppC	-
RdKW20_RS08475 (RdKW20_001603)	-	1699606..1700577 (+)	972	WP_005651797.1	ABC transporter ATP-binding protein	-
RdKW20_RS08480 (RdKW20_001604)	oppF	1700574..1701572 (+)	999	WP_005657282.1	murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF	-
RdKW20_RS08485 (RdKW20_001605)	-	1701612..1702478 (-)	867	WP_005651791.1	VirK/YbjX family protein	-
RdKW20_RS08490 (RdKW20_001606)	yihA	1702583..1703200 (+)	618	WP_005651790.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
RdKW20_RS08495 (RdKW20_001607)	comM	1703315..1704844 (+)	1530	WP_005693440.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
RdKW20_RS08500 (RdKW20_001608)	deoC	1704878..1705549 (-)	672	WP_005693439.1	deoxyribose-phosphate aldolase	-
RdKW20_RS08505 (RdKW20_001609)	-	1705660..1706163 (+)	504	WP_005693438.1	protein disulfide oxidoreductase	-
RdKW20_RS08510 (RdKW20_001610)	rfaD	1706216..1707142 (+)	927	WP_005632797.1	ADP-glyceromanno-heptose 6-epimerase	-
RdKW20_RS08515 (RdKW20_001611)	xylB	1707193..1708674 (-)	1482	WP_032828343.1	xylulokinase	-

Sequence

Protein

• Length: 509 a.a.
• Molecular weight: 55871.35 Da
• Isoelectric Point: 9.7683

>NTDB_id=943853 RdKW20_RS08495 WP_005693440.1 1703315..1704844(+) (comM) [Haemophilus influenzae strain Rd-KW20]
MSLAIVYSRASMGVQAPLVTIEVHLSNGKPGFTLVGLPEKTVKEAQDRVRSALMNAQFKYPAKRITVNLAPADLPKEGGR
FDLPIAIGILAASDQLDASHLKQFEFVAELALTGQLRGVHGVIPAILAAQKSKRELIIAKQNANEASLVSDQNTYFAQTL
LDVVQFLNGQEKLPLATEIVKESAVNFSGKNTLDLTDIIGQQHAKRALTIAAAGQHNLLFLGPPGTGKTMLASRLTGLLP
EMTDLEAIETASVTSLVQNELNFHNWKQRPFRAPHHSASMPALVGGGTIPKPGEISLATNGVLFLDELPEFERKVLDALR
QPLESGEIIISRANAKIQFPARFQLVAAMNPSPTGHYTGTHNRTSPQQIMRYLNRLSGPFLDRFDLSIEVPLLPQGSLQN
TGDRGETSAQVREKVLKVREIQMERAGKINAYLNSKEIERDCKLNDKDAFFLEKALNKLGLSVRAYHRILKVSRTIADLQ
GEQQISQPHLAEALGYRAMDRLLQKLSNM

Nucleotide

• Length: 1530 bp

>NTDB_id=943853 RdKW20_RS08495 WP_005693440.1 1703315..1704844(+) (comM) [Haemophilus influenzae strain Rd-KW20]
ATGTCCCTTGCTATTGTTTACAGCCGTGCCTCTATGGGCGTGCAAGCGCCGCTTGTCACCATTGAGGTGCATTTAAGCAA
CGGAAAACCAGGATTTACACTTGTTGGTTTGCCAGAAAAAACCGTGAAAGAGGCACAAGATAGGGTGCGTAGTGCGTTGA
TGAATGCACAATTTAAATACCCAGCCAAGCGTATCACTGTAAATCTTGCACCTGCGGATTTACCGAAAGAAGGCGGAAGA
TTTGATTTGCCTATCGCCATCGGAATTTTAGCCGCATCAGATCAGCTTGATGCGAGCCACTTAAAGCAATTTGAATTTGT
GGCAGAGCTTGCGCTGACGGGCCAATTGCGTGGCGTACATGGTGTGATTCCCGCTATTCTTGCAGCGCAAAAGTCAAAGC
GAGAGTTAATTATTGCGAAACAAAATGCTAATGAAGCCTCGCTCGTGTCTGATCAAAATACTTATTTTGCTCAAACGCTT
TTAGATGTAGTGCAATTTCTCAATGGTCAGGAAAAATTACCACTCGCCACTGAAATTGTGAAAGAAAGTGCGGTAAATTT
TTCAGGTAAAAATACGTTAGATTTAACGGATATTATCGGACAACAGCACGCTAAACGAGCATTGACCATTGCCGCAGCGG
GGCAGCATAATTTGCTCTTTCTTGGCCCACCGGGTACAGGGAAAACCATGTTAGCCAGCCGTTTGACAGGGCTTTTACCT
GAAATGACAGATTTAGAAGCGATAGAAACGGCATCTGTAACGAGTTTAGTTCAAAACGAGTTAAATTTTCATAATTGGAA
GCAACGTCCTTTTCGTGCACCACATCATAGTGCATCAATGCCTGCTTTAGTTGGTGGCGGAACGATCCCTAAACCTGGCG
AAATATCCTTAGCAACAAATGGGGTACTTTTTCTTGATGAACTTCCAGAATTTGAGCGAAAAGTGTTAGATGCACTACGT
CAGCCTTTGGAAAGTGGTGAGATTATTATTTCTCGTGCTAATGCCAAAATTCAATTTCCGGCTCGTTTTCAATTAGTGGC
AGCAATGAATCCAAGTCCGACAGGCCATTATACAGGAACACATAACCGCACTTCACCACAGCAAATTATGCGTTATTTGA
ATCGACTTTCAGGGCCATTTTTAGATCGTTTTGATTTATCTATTGAAGTGCCTTTACTGCCACAAGGTAGCTTGCAAAAT
ACGGGCGATCGTGGCGAAACCAGCGCGCAAGTTCGTGAAAAAGTGTTAAAAGTACGTGAGATTCAAATGGAAAGAGCGGG
GAAAATCAACGCTTATTTGAACAGTAAAGAGATTGAGCGTGATTGCAAGTTAAATGATAAAGATGCCTTTTTCCTTGAAA
AAGCACTGAATAAACTGGGGCTTTCTGTTCGGGCTTATCATCGTATTTTGAAAGTTTCTCGAACCATTGCCGATCTACAA
GGAGAACAACAAATTTCTCAACCGCACTTGGCGGAGGCCTTGGGCTATCGAGCAATGGATCGTTTGCTGCAGAAATTGTC
GAATATGTAA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (194-395)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (405-497)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	99.607	100	0.996
comM	Glaesserella parasuis strain SC1401	79.093	99.607	0.788
comM	Vibrio cholerae strain A1552	67.456	99.607	0.672
comM	Vibrio campbellii strain DS40M4	66.075	99.607	0.658
comM	Legionella pneumophila str. Paris	51.093	98.821	0.505
comM	Legionella pneumophila strain ERS1305867	51.093	98.821	0.505
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.99	100	0.475