Detailed information NTG0942359

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: V6V88_RS09300
• Genome accession: NZ_CP146253
• Coordinates: 2053015..2054541 (+)
• Length: 508 a.a.
• NCBI ID: WP_338618949.1
• Uniprot ID: -
• Organism: Achromobacter sp. E1
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2048015..2059541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6V88_RS09275 (V6V88_09275)	-	2048060..2048329 (+)	270	WP_006387993.1	HPr family phosphocarrier protein	-
V6V88_RS09280 (V6V88_09280)	ptsP	2048493..2050151 (+)	1659	WP_338619567.1	phosphoenolpyruvate--protein phosphotransferase	-
V6V88_RS09285 (V6V88_09285)	amt	2050343..2051581 (-)	1239	WP_056315887.1	ammonium transporter	-
V6V88_RS09290 (V6V88_09290)	-	2051610..2051948 (-)	339	WP_006218735.1	P-II family nitrogen regulator	-
V6V88_RS09295 (V6V88_09295)	-	2052622..2052897 (+)	276	WP_223575109.1	accessory factor UbiK family protein	-
V6V88_RS09300 (V6V88_09300)	comM	2053015..2054541 (+)	1527	WP_338618949.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
V6V88_RS09305 (V6V88_09305)	rpmI	2054850..2055047 (+)	198	WP_008159912.1	50S ribosomal protein L35	-
V6V88_RS09310 (V6V88_09310)	rplT	2055065..2055424 (+)	360	WP_006218741.1	50S ribosomal protein L20	-
V6V88_RS09315 (V6V88_09315)	pheS	2055502..2056524 (+)	1023	WP_056315894.1	phenylalanine--tRNA ligase subunit alpha	-
V6V88_RS09320 (V6V88_09320)	pheT	2056538..2058955 (+)	2418	WP_338618952.1	phenylalanine--tRNA ligase subunit beta	-
V6V88_RS09325 (V6V88_09325)	-	2058958..2059296 (+)	339	WP_081101104.1	integration host factor subunit alpha	-

Sequence

Protein

• Length: 508 a.a.
• Molecular weight: 52614.89 Da
• Isoelectric Point: 8.3692

>NTDB_id=942359 V6V88_RS09300 WP_338618949.1 2053015..2054541(+) (comM) [Achromobacter sp. E1]
MTLAVLASRALCGMHAHAVRVETHLGPGLPGFNVVGLVDTEVRESRERVRAAIINSGFEFPAGRITVNLSPADMPKESGR
FDLPIALGVLLASGQLAAPAQDGAPAGAPDPALAGLVLAGELSLTGALVPVAAPLVIALSVARDAPDATLILPAGSAEQA
AWVPGLRVLSARCLADVAAHAAGACLLPNAVPAPWPPAAPVPCLSDVRGQPGARRALEVAAAGGHSLLMLGPPGAGKSML
AARLPGLLPPLERNQALEAAAVATMAGMPDTLTGQPPFRAPHHSASVAALVGGGGRPRPGEISLAHHGVLFLDELPEFSR
RSLEALREPLEAGRVVISRALHAAQFPARFQLVAAMNPCPCGWRGHPARTCACTPDQVTRYAGKISGPLLDRIDLHVALP
PSDPAWMTAPPGESSQAVRERVVRCRERQMARQGKINAGLAGAELDEFCVMDADAQTLLQQAMRRLTGSARAMHRALRVA
RTIADLDGQAVLAASHVAQAVQYRRTGV

Nucleotide

• Length: 1527 bp

>NTDB_id=942359 V6V88_RS09300 WP_338618949.1 2053015..2054541(+) (comM) [Achromobacter sp. E1]
GTGACGCTTGCCGTACTTGCCAGCCGGGCCCTTTGCGGCATGCATGCCCATGCGGTCCGCGTGGAAACGCACCTGGGGCC
TGGGCTGCCGGGTTTCAACGTTGTCGGGCTGGTCGACACCGAAGTCCGGGAAAGCCGCGAGCGGGTCCGCGCGGCCATCA
TCAACAGCGGTTTTGAATTTCCGGCGGGGCGCATCACCGTCAACCTGTCGCCGGCCGACATGCCCAAGGAGTCCGGCCGC
TTTGATCTGCCGATTGCGTTGGGGGTGCTGCTGGCGTCCGGGCAGTTGGCTGCCCCCGCGCAAGACGGTGCACCTGCCGG
CGCACCGGATCCCGCGCTGGCCGGGCTGGTGCTTGCCGGCGAACTTTCCCTCACCGGGGCGCTTGTGCCCGTCGCCGCGC
CGCTGGTGATCGCCCTGAGCGTCGCCCGGGACGCGCCCGACGCCACGCTTATCCTGCCAGCCGGCAGCGCCGAGCAGGCC
GCCTGGGTTCCCGGCTTGCGTGTGCTGTCGGCCCGCTGCCTGGCGGACGTGGCAGCCCACGCAGCTGGCGCCTGCCTGCT
TCCCAATGCCGTGCCCGCGCCGTGGCCGCCCGCCGCGCCCGTCCCCTGTCTGTCGGATGTGCGGGGCCAGCCGGGCGCGC
GGCGGGCGCTTGAAGTCGCGGCGGCGGGCGGCCACAGCCTGTTGATGCTGGGGCCGCCCGGTGCGGGCAAGAGCATGCTG
GCCGCACGCCTGCCGGGCCTGCTGCCGCCGCTGGAGCGCAATCAGGCGCTCGAAGCGGCGGCCGTGGCGACGATGGCCGG
AATGCCCGACACGCTCACCGGGCAGCCGCCGTTCAGGGCGCCGCACCATTCGGCTTCGGTAGCCGCGCTGGTCGGCGGTG
GCGGGCGCCCGCGGCCCGGTGAAATCAGTCTGGCGCATCACGGCGTGCTGTTCCTCGATGAGCTTCCGGAATTCAGCCGC
CGCTCGCTCGAGGCGCTGCGAGAGCCGCTGGAGGCGGGCAGGGTGGTCATCTCGCGGGCGTTGCACGCCGCGCAGTTTCC
GGCCCGTTTTCAGCTCGTGGCCGCAATGAATCCCTGTCCTTGCGGCTGGCGCGGCCATCCGGCGCGCACGTGCGCCTGCA
CGCCGGATCAGGTGACGCGTTATGCGGGCAAGATATCGGGACCGTTACTGGACCGGATCGATCTGCATGTGGCCCTGCCG
CCGTCCGATCCCGCCTGGATGACCGCGCCTCCCGGCGAATCGTCGCAAGCCGTCCGCGAGCGCGTGGTCCGCTGCCGTGA
ACGCCAGATGGCCCGCCAGGGCAAGATCAACGCCGGGCTGGCCGGGGCCGAGCTGGACGAATTCTGCGTGATGGATGCCG
ATGCCCAGACGCTGCTGCAGCAGGCCATGCGCCGCCTGACAGGCTCGGCGCGGGCGATGCACCGGGCGCTGCGCGTGGCC
CGCACGATCGCGGATCTGGACGGCCAGGCGGTGCTGGCGGCCAGTCATGTCGCGCAGGCGGTGCAGTACCGGCGTACGGG
GGTATGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-154)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (412-504)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (204-402)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	48.924	100	0.492
comM	Vibrio campbellii strain DS40M4	47.451	100	0.476
comM	Haemophilus influenzae Rd KW20	46.887	100	0.474
comM	Legionella pneumophila str. Paris	44.914	100	0.461
comM	Legionella pneumophila strain ERS1305867	44.914	100	0.461
comM	Glaesserella parasuis strain SC1401	45.349	100	0.461
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	41.506	100	0.423