Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | NGJ87_RS01585 | Genome accession | NZ_AP025787 |
| Coordinates | 328063..328587 (+) | Length | 174 a.a. |
| NCBI ID | WP_003860284.1 | Uniprot ID | A0A9Q2WCG9 |
| Organism | Enterobacter hormaechei strain FUJ80013 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 323063..333587
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NGJ87_RS01565 (FJMB80013_02950) | aphA | 323387..324100 (+) | 714 | WP_022646749.1 | acid phosphatase AphA | - |
| NGJ87_RS01570 (FJMB80013_02960) | - | 324213..324629 (+) | 417 | WP_022646750.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| NGJ87_RS01575 (FJMB80013_02970) | - | 324632..324985 (+) | 354 | WP_006810472.1 | MmcQ/YjbR family DNA-binding protein | - |
| NGJ87_RS01580 (FJMB80013_02980) | uvrA | 324989..327811 (-) | 2823 | WP_003860287.1 | excinuclease ABC subunit UvrA | - |
| NGJ87_RS01585 (FJMB80013_02990) | ssb | 328063..328587 (+) | 525 | WP_003860284.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| NGJ87_RS01590 (FJMB80013_03000) | - | 328648..328929 (-) | 282 | WP_022646751.1 | YjcB family protein | - |
| NGJ87_RS01595 (FJMB80013_03010) | - | 329361..330761 (+) | 1401 | WP_032621426.1 | sensor domain-containing diguanylate cyclase | - |
| NGJ87_RS25315 | - | 331027..331155 (+) | 129 | WP_276523097.1 | hypothetical protein | - |
| NGJ87_RS01600 | - | 331259..332467 (+) | 1209 | WP_001339197.1 | IS4-like element ISVsa5 family transposase | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18650.66 Da Isoelectric Point: 5.2456
>NTDB_id=94214 NGJ87_RS01585 WP_003860284.1 328063..328587(+) (ssb) [Enterobacter hormaechei strain FUJ80013]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGQEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAP
SNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGQEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAP
SNEPPMDFDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=94214 NGJ87_RS01585 WP_003860284.1 328063..328587(+) (ssb) [Enterobacter hormaechei strain FUJ80013]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAAATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCCGGTGAGTATCTGCGTAAGGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAATCCGGTCAGGAAAAATACACCACGGAAGTGGTGGTCAACGTAGG
CGGCACCATGCAGATGCTGGGTGGTCGTCAGGGCGGTGGCGCACCGGCAGGTGGCGGCCAGCAGCAGGGCGGTTGGGGTC
AGCCTCAACAGCCTCAGGGCGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGTCCTCAGCAGCAGTCTGCTCCGGCACCG
TCTAACGAACCGCCAATGGACTTCGACGACGATATCCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAAATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCCGGTGAGTATCTGCGTAAGGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAATCCGGTCAGGAAAAATACACCACGGAAGTGGTGGTCAACGTAGG
CGGCACCATGCAGATGCTGGGTGGTCGTCAGGGCGGTGGCGCACCGGCAGGTGGCGGCCAGCAGCAGGGCGGTTGGGGTC
AGCCTCAACAGCCTCAGGGCGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGTCCTCAGCAGCAGTCTGCTCCGGCACCG
TCTAACGAACCGCCAATGGACTTCGACGACGATATCCCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
76.667 |
100 |
0.793 |
| ssb | Glaesserella parasuis strain SC1401 |
57.923 |
100 |
0.609 |
| ssb | Neisseria meningitidis MC58 |
47.191 |
100 |
0.483 |
| ssb | Neisseria gonorrhoeae MS11 |
47.191 |
100 |
0.483 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
36.111 |
100 |
0.374 |