Detailed information NTG0941054

Bioinformatically predicted

Overview

• Name: comQ
• Type: Machinery gene
• Locus tag: V5M36_RS01415
• Genome accession: NZ_CP145906
• Coordinates: 314250..316907 (+)
• Length: 885 a.a.
• NCBI ID: WP_338563971.1
• Uniprot ID: -
• Organism: Acinetobacter sp. KS-LM10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 309250..321907

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5M36_RS01395 (V5M36_01395)	comM	311252..312310 (+)	1059	WP_338561255.1	pilus assembly protein PilM	Machinery gene
V5M36_RS01400 (V5M36_01400)	comN	312310..312936 (+)	627	WP_338561258.1	PilN domain-containing protein	Machinery gene
V5M36_RS01405 (V5M36_01405)	comO	312933..313655 (+)	723	WP_338561260.1	type 4a pilus biogenesis protein PilO	Machinery gene
V5M36_RS01410 (V5M36_01410)	pilP	313658..314185 (+)	528	WP_338563969.1	pilus assembly protein PilP	Machinery gene
V5M36_RS01415 (V5M36_01415)	comQ	314250..316907 (+)	2658	WP_338563971.1	type IV pilus secretin PilQ	Machinery gene
V5M36_RS01420 (V5M36_01420)	aroK	316944..317486 (+)	543	WP_338561263.1	shikimate kinase AroK	-
V5M36_RS01425 (V5M36_01425)	aroB	317511..318593 (+)	1083	WP_338561265.1	3-dehydroquinate synthase	-
V5M36_RS01430 (V5M36_01430)	-	318605..319459 (+)	855	WP_338561266.1	hypothetical protein	-

Sequence

Protein

• Length: 885 a.a.
• Molecular weight: 95175.61 Da
• Isoelectric Point: 9.0352

>NTDB_id=941054 V5M36_RS01415 WP_338563971.1 314250..316907(+) (comQ) [Acinetobacter sp. KS-LM10]
MNSMLRQFTLAAVSVAVMQAASAKTVLTNIVPLEVSGQGTEIRMMFDGLPPKPQSYQLENPARLVLDFSQTSQTLSKPSI
PASTTEASSIDVTSNDKRSRVTINLKNKGSYTTRVEGNTLILKINNPNAKLPKPDAVTASKETKTLAPVIQVPQVLSPTA
PISNNVAATSTRLAAPITTTSEAIPKAESEGFWRKVFPKAQEQNLAVASNPISAARGVVVVPNSIATPATPVLNKAPAIN
QVIRPVAPSSQPMSTAAAKPVAKVTIVAQNISPVVPVMSYMPVNTSAVKPLTTTAVYPIAEPVSVAQSVMPVEYQQPVQG
LADIGFQRGSAGEGQVVLNLKSANTPVDVQQQGSKVVVRFLGNKIPTHLVRRLNVNDFATPVATVDAYNDRSNGVISIQS
EGSFEYMAYQTDGNLTISLKRPEDKKGLTTSKQSAKYIGNKISLDFQDIEVRRVLQLLADFTSINMVASDTVQGNITLRL
KDVPWDQALDIVMKTKNLDKRRNGNVIWIAPVSELIKVEEDEAKAIAQSVKLAPLQTEYIQLNYAKVIDIEKLITQGRNN
GTSNNSNASGATVDILGDSVGSLLSPRGTVSVDPRTNTLIINDTAQKIDQIRKMIDLLDVSVKQVMIEARIVRATTDFTK
EMGVKWGLISQGVNRNNDLLIGGSDQTLWDLKSPDADGKYNIQRPDNLNVDLGVTNAAGKIAFGLINMSDFMLDLELSAL
QADGYGEVISTPKVLTADKQKARVASGQEIPYQTTETAGGTATATTSFKEALLSLEVTPSITPDGKVQMELNITSDSPAG
TAPNGEIILNKNAIDTNVLVDNGETVVLGGIFEQETLNSQVKVPFLGDLPAIGRLFRKDSKSESKRELLIFVTPRIVNDS
QTRNH

Nucleotide

• Length: 2658 bp

>NTDB_id=941054 V5M36_RS01415 WP_338563971.1 314250..316907(+) (comQ) [Acinetobacter sp. KS-LM10]
ATGAATAGCATGCTTCGTCAATTTACATTGGCAGCGGTAAGTGTTGCAGTTATGCAAGCAGCTTCTGCAAAAACAGTTTT
GACCAACATTGTTCCACTTGAAGTTTCTGGTCAAGGGACAGAAATTCGTATGATGTTTGATGGCTTACCTCCGAAACCTC
AATCCTATCAACTTGAAAATCCAGCTCGTTTAGTTTTGGATTTTAGTCAAACGTCTCAAACATTAAGTAAACCAAGTATT
CCTGCTTCGACGACTGAAGCAAGCTCAATCGACGTGACGTCAAATGATAAACGTTCAAGAGTAACCATTAATTTAAAGAA
TAAAGGTAGCTATACAACGCGTGTAGAGGGCAATACATTAATTCTAAAAATTAATAATCCCAATGCGAAATTGCCTAAAC
CTGATGCGGTAACAGCATCTAAAGAAACCAAAACCTTGGCGCCTGTTATACAGGTTCCTCAAGTTTTAAGCCCGACTGCT
CCAATTTCGAATAACGTTGCTGCAACATCGACAAGATTGGCAGCGCCGATAACGACAACTTCAGAAGCCATTCCTAAAGC
TGAGTCAGAAGGGTTTTGGCGTAAAGTTTTTCCTAAAGCACAAGAGCAAAACTTAGCTGTAGCGAGTAATCCTATATCTG
CGGCCAGAGGCGTAGTGGTGGTGCCGAATAGTATTGCAACACCGGCTACACCCGTTTTGAATAAAGCACCTGCCATAAAT
CAAGTGATTCGTCCCGTGGCACCGTCATCTCAACCGATGAGCACAGCTGCGGCTAAGCCAGTCGCAAAAGTGACTATAGT
TGCACAAAATATCAGTCCAGTCGTACCTGTAATGAGCTATATGCCAGTAAATACTTCGGCTGTTAAACCCCTTACAACGA
CTGCGGTCTATCCGATAGCTGAACCTGTTTCTGTAGCTCAATCTGTAATGCCTGTTGAATATCAACAACCAGTGCAAGGT
TTAGCGGATATCGGTTTTCAGCGCGGTAGTGCGGGCGAAGGTCAAGTGGTACTCAATCTCAAATCAGCAAATACGCCAGT
TGATGTTCAGCAACAAGGCAGCAAAGTTGTTGTTCGATTCCTAGGCAATAAAATTCCAACCCATTTGGTTCGACGTTTAA
ACGTGAATGATTTTGCGACGCCAGTTGCAACGGTGGATGCGTATAATGATAGATCTAACGGTGTCATTTCGATTCAATCG
GAAGGCAGTTTCGAGTATATGGCCTATCAAACAGATGGCAATCTGACCATTAGTTTGAAACGACCAGAAGACAAGAAAGG
TTTAACCACCAGCAAGCAAAGTGCTAAATATATTGGCAATAAAATCTCATTAGATTTTCAAGATATTGAAGTCCGAAGAG
TACTTCAACTTTTAGCCGATTTTACCAGTATTAATATGGTGGCATCGGATACGGTACAAGGCAATATTACTTTACGTTTA
AAAGATGTGCCTTGGGATCAAGCGCTTGATATCGTCATGAAAACTAAGAACTTAGATAAGCGTCGCAATGGTAATGTGAT
TTGGATTGCACCTGTATCTGAGCTGATTAAGGTAGAAGAAGATGAAGCCAAAGCCATTGCCCAAAGCGTTAAATTAGCGC
CGTTACAAACTGAGTATATTCAACTTAATTATGCCAAAGTCATCGATATTGAAAAGTTGATTACTCAAGGTCGCAATAAT
GGGACTTCAAATAATAGCAATGCTTCAGGGGCAACAGTTGATATCCTTGGTGATAGCGTAGGTTCTTTGCTGAGTCCGCG
TGGAACTGTTTCTGTGGATCCAAGAACGAATACATTAATTATTAATGATACAGCTCAAAAAATTGATCAAATTCGTAAAA
TGATCGATTTATTGGATGTGTCGGTAAAACAGGTGATGATTGAAGCACGTATTGTTCGTGCGACCACTGACTTTACCAAA
GAAATGGGTGTGAAGTGGGGACTTATTTCTCAGGGTGTAAATAGAAATAACGATCTTTTAATTGGTGGTAGTGATCAAAC
ACTGTGGGATTTGAAATCACCAGATGCCGATGGTAAATATAATATTCAACGTCCAGATAATTTAAATGTTGATTTGGGCG
TGACCAATGCGGCAGGTAAAATCGCATTTGGTTTGATTAATATGTCTGACTTTATGTTGGATTTAGAGCTTTCTGCATTA
CAAGCAGATGGTTATGGTGAAGTGATTTCGACACCAAAAGTTTTAACAGCAGATAAACAAAAAGCGCGTGTTGCTTCAGG
TCAGGAAATTCCTTATCAAACCACAGAAACAGCGGGTGGAACGGCAACAGCAACAACCTCATTTAAAGAAGCTTTATTGA
GCCTTGAAGTCACACCAAGTATTACCCCAGATGGTAAGGTGCAAATGGAGTTGAACATTACCAGTGACTCACCAGCAGGC
ACGGCACCGAATGGTGAAATTATTCTGAATAAGAATGCAATTGATACCAATGTGCTGGTCGATAATGGTGAAACAGTGGT
GTTGGGCGGGATCTTTGAACAAGAAACATTAAACTCTCAAGTCAAGGTTCCTTTCTTGGGAGATTTGCCTGCGATTGGTC
GATTATTCCGTAAAGATAGTAAATCTGAAAGTAAACGAGAGTTATTAATCTTTGTGACACCAAGAATTGTTAATGACAGT
CAAACTAGAAATCATTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (719-877)

• AMIN domain (AMIN) (36-123)

• Secretin and TonB N terminus short domain (STN) (468-511)

• Bacterial type II/III secretion system short domain (Secretin_N) (538-624)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comQ	Acinetobacter baylyi ADP1	75.789	64.407	0.488
pilQ	Acinetobacter baumannii strain A118	72.269	67.232	0.486
pilQ	Acinetobacter baumannii D1279779	72.712	66.667	0.485