Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   V6U66_RS03240 Genome accession   NZ_CP145864
Coordinates   622794..623879 (+) Length   361 a.a.
NCBI ID   WP_037601740.1    Uniprot ID   A0A074IQF0
Organism   Streptococcus salivarius strain KSS7     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 617794..628879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS03225 (V6U66_03225) amiA 618334..620304 (+) 1971 WP_013990224.1 peptide ABC transporter substrate-binding protein Regulator
  V6U66_RS03230 (V6U66_03230) amiC 620365..621858 (+) 1494 WP_014632819.1 ABC transporter permease Regulator
  V6U66_RS03235 (V6U66_03235) amiD 621858..622784 (+) 927 WP_022496729.1 oligopeptide ABC transporter permease OppC Regulator
  V6U66_RS03240 (V6U66_03240) amiE 622794..623879 (+) 1086 WP_037601740.1 ABC transporter ATP-binding protein Regulator
  V6U66_RS03245 (V6U66_03245) amiF 623872..624801 (+) 930 WP_014634820.1 ATP-binding cassette domain-containing protein Regulator
  V6U66_RS03250 (V6U66_03250) - 624852..625637 (-) 786 WP_041826692.1 hypothetical protein -
  V6U66_RS03255 (V6U66_03255) - 625649..626347 (-) 699 WP_118058083.1 ABC transporter ATP-binding protein -
  V6U66_RS03260 (V6U66_03260) - 626352..626729 (-) 378 WP_002884206.1 GntR family transcriptional regulator -
  V6U66_RS03265 (V6U66_03265) - 626911..627705 (+) 795 WP_118058082.1 HAD-IIB family hydrolase -
  V6U66_RS03270 (V6U66_03270) - 627698..628516 (+) 819 WP_410534575.1 Cof-type HAD-IIB family hydrolase -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39981.66 Da        Isoelectric Point: 4.6135

>NTDB_id=940574 V6U66_RS03240 WP_037601740.1 622794..623879(+) (amiE) [Streptococcus salivarius strain KSS7]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGQDL
TKLKSHQDWAAIRGAKIATIFQDPMTSLDPIKTIGSQIVEVIVKHQGKSAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDKGELFSIPGTPPSLYTPVVGDAFALRSDYAMQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVEKPEVIQNLHEKIRTNMGFAHLGDEEEGNA

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=940574 V6U66_RS03240 WP_037601740.1 622794..623879(+) (amiE) [Streptococcus salivarius strain KSS7]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCCCTTGATTTGGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGTAAATCAGTTT
TGACCAAGACCTTCACAGGGATGCTTGAAGAAAATGGTCGTGTCGCTAGTGGTTCTATTGATTATCGTGGCCAAGATTTG
ACCAAGCTTAAGAGTCACCAAGATTGGGCAGCAATTCGTGGAGCTAAGATTGCAACTATCTTCCAAGATCCTATGACCAG
TCTTGACCCAATTAAGACTATCGGTAGCCAAATTGTTGAAGTCATTGTCAAACACCAAGGAAAATCAGCCAAAGAAGCTA
AAAAAATGGCCATTGATTACATGGACAAGGTTGGTATTCCTGATGCTGAAAAACGTTTCAACGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTCATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAGCCAAC
AACTGCCCTTGACGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTTAAAGAAGAGTACGGTTTCTCAGTGA
TTTTCATTACCCATGACCTTGGTGTGGTAGCAAGTATCGCTGACAAGGTTGCTGTTATGTATGCTGGTGAAATCATCGAG
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCACCCATACACTTGGAGCTTGCTTTCAAGCTTGCCACAGTTGGC
TGACGATAAGGGTGAGCTTTTCTCTATTCCAGGGACACCACCATCACTTTATACACCAGTTGTTGGAGATGCCTTTGCCT
TGCGTTCAGACTATGCCATGCAAATTGACTTCGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCACCAAAAGTTGAAAAACCTGAGGTTATCCAAAATCTACATGAAAAAATCCGTACTAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A074IQF0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

99.169

100

0.992

  amiE Streptococcus thermophilus LMG 18311

96.676

100

0.967

  amiE Streptococcus thermophilus LMD-9

96.676

100

0.967

  oppD Streptococcus mutans UA159

54.728

96.676

0.529