Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABUS02_RS13790 Genome accession   NZ_CP169779
Coordinates   2814176..2815117 (-) Length   313 a.a.
NCBI ID   WP_031961018.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain Hv635     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2809176..2820117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABUS02_RS13775 bauB 2811487..2812455 (-) 969 WP_001104128.1 siderophore-binding periplasmic lipoprotein BauB -
  ABUS02_RS13780 bauE 2812462..2813232 (-) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  ABUS02_RS13785 bauC 2813229..2814176 (-) 948 WP_031961017.1 ferric acinetobactin ABC transporter permease subunit BauC -
  ABUS02_RS13790 ceuB 2814176..2815117 (-) 942 WP_031961018.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  ABUS02_RS13795 - 2815117..2815248 (-) 132 WP_001218004.1 hypothetical protein -
  ABUS02_RS13800 basB 2815748..2817775 (+) 2028 WP_109067377.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  ABUS02_RS13805 basA 2817846..2819693 (-) 1848 WP_031961022.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34057.10 Da        Isoelectric Point: 8.4665

>NTDB_id=940340 ABUS02_RS13790 WP_031961018.1 2814176..2815117(-) (ceuB) [Acinetobacter baumannii strain Hv635]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGFILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYATIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=940340 ABUS02_RS13790 WP_031961018.1 2814176..2815117(-) (ceuB) [Acinetobacter baumannii strain Hv635]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCTTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGTTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGTTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGCTTAGGACTCA
GTTATGCGACTATAGCCGCCATTGGTTTGATACTGGTTGCTATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTAGC
GTTGGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGTCGCTCAATTATTTACCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTAGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419