Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   V5G09_RS02340 Genome accession   NZ_CP145088
Coordinates   450849..451457 (+) Length   202 a.a.
NCBI ID   WP_003692820.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain WHO_B_2024     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 445849..456457
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G09_RS02315 (V5G09_02315) - 446347..446679 (+) 333 WP_003687908.1 hypothetical protein -
  V5G09_RS02320 (V5G09_02320) - 447006..447515 (+) 510 WP_003687909.1 isoprenylcysteine carboxyl methyltransferase family protein -
  V5G09_RS02325 (V5G09_02325) - 447747..448328 (-) 582 WP_003698180.1 superoxide dismutase -
  V5G09_RS02330 (V5G09_02330) dnaB 448492..449895 (+) 1404 WP_047917841.1 replicative DNA helicase -
  V5G09_RS02335 (V5G09_02335) pilH 450152..450817 (+) 666 WP_003692819.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  V5G09_RS02340 (V5G09_02340) pilV 450849..451457 (+) 609 WP_003692820.1 type IV pilus modification protein PilV Machinery gene
  V5G09_RS02345 (V5G09_02345) pilJ 451454..452398 (+) 945 WP_048339587.1 PilW family protein Machinery gene
  V5G09_RS02350 (V5G09_02350) pilK 452377..452976 (+) 600 WP_082295400.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  V5G09_RS02355 (V5G09_02355) pilL 452978..453451 (+) 474 WP_192941311.1 PilX family type IV pilin Machinery gene
  V5G09_RS02360 (V5G09_02360) - 453521..453829 (-) 309 WP_010359926.1 AzlD family protein -
  V5G09_RS02365 (V5G09_02365) - 453826..454536 (-) 711 Protein_461 AzlC family ABC transporter permease -
  V5G09_RS02370 (V5G09_02370) dut 454702..455154 (+) 453 WP_003687923.1 dUTP diphosphatase -
  V5G09_RS02375 (V5G09_02375) dapC 455226..456413 (+) 1188 WP_071197481.1 succinyldiaminopimelate transaminase -

Sequence

Protein


Download         Length: 202 a.a.        Molecular weight: 21963.00 Da        Isoelectric Point: 5.0254

>NTDB_id=937128 V5G09_RS02340 WP_003692820.1 450849..451457(+) (pilV) [Neisseria gonorrhoeae strain WHO_B_2024]
MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMRNSIPSAVDGDFKVDAVKSKVQLADEQLKRFGYELKNALPDAVAIHYAVCKDSSGKAPALSGDAFSSNCDNKENG
DTLIKVLWVNDSAGDSDISRTNLEVSGGNIVYTYQARVGGRE

Nucleotide


Download         Length: 609 bp        

>NTDB_id=937128 V5G09_RS02340 WP_003692820.1 450849..451457(+) (pilV) [Neisseria gonorrhoeae strain WHO_B_2024]
ATGAAGAATAATGATTGCTTGCGCCTGAAAAATCCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCATTGCTGTCCGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGAGAAACTCTATACCATCAGCTGTGGATGGCGATTTTAAGGTTGATGCCGTGAAAAGTAAGGTGCA
GTTGGCGGATGAACAATTGAAGAGATTTGGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGTAGCTATTCATTACGCCG
TCTGCAAGGATTCGTCGGGTAAGGCGCCGGCATTGTCCGGCGATGCTTTTTCTTCAAATTGCGACAATAAGGAAAACGGG
GATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCTTGAGGTGAGCGG
CGGCAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGTGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

89.806

100

0.916
  pilI Neisseria gonorrhoeae MS11

85.644

100

0.856
  pilV Neisseria gonorrhoeae MS11

85.644

100

0.856