Detailed information
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | V5G09_RS02345 | Genome accession | NZ_CP145088 |
| Coordinates | 451454..452398 (+) | Length | 314 a.a. |
| NCBI ID | WP_048339587.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain WHO_B_2024 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 446454..457398
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V5G09_RS02320 (V5G09_02320) | - | 447006..447515 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| V5G09_RS02325 (V5G09_02325) | - | 447747..448328 (-) | 582 | WP_003698180.1 | superoxide dismutase | - |
| V5G09_RS02330 (V5G09_02330) | dnaB | 448492..449895 (+) | 1404 | WP_047917841.1 | replicative DNA helicase | - |
| V5G09_RS02335 (V5G09_02335) | pilH | 450152..450817 (+) | 666 | WP_003692819.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| V5G09_RS02340 (V5G09_02340) | pilV | 450849..451457 (+) | 609 | WP_003692820.1 | type IV pilus modification protein PilV | Machinery gene |
| V5G09_RS02345 (V5G09_02345) | pilJ | 451454..452398 (+) | 945 | WP_048339587.1 | PilW family protein | Machinery gene |
| V5G09_RS02350 (V5G09_02350) | pilK | 452377..452976 (+) | 600 | WP_082295400.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| V5G09_RS02355 (V5G09_02355) | pilL | 452978..453451 (+) | 474 | WP_192941311.1 | PilX family type IV pilin | Machinery gene |
| V5G09_RS02360 (V5G09_02360) | - | 453521..453829 (-) | 309 | WP_010359926.1 | AzlD family protein | - |
| V5G09_RS02365 (V5G09_02365) | - | 453826..454536 (-) | 711 | Protein_461 | AzlC family ABC transporter permease | - |
| V5G09_RS02370 (V5G09_02370) | dut | 454702..455154 (+) | 453 | WP_003687923.1 | dUTP diphosphatase | - |
| V5G09_RS02375 (V5G09_02375) | dapC | 455226..456413 (+) | 1188 | WP_071197481.1 | succinyldiaminopimelate transaminase | - |
| V5G09_RS02380 (V5G09_02380) | yaaA | 456569..457348 (+) | 780 | WP_003692836.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 314 a.a. Molecular weight: 34479.21 Da Isoelectric Point: 8.7147
>NTDB_id=937129 V5G09_RS02345 WP_048339587.1 451454..452398(+) (pilJ) [Neisseria gonorrhoeae strain WHO_B_2024]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHIEQDVVSDVTQKNSPFSLKRNSTRNSTNKLIPIAESSNIGYQGFIQRLNALIFQYGIDDVNASAATTVVSSCG
AISKPSKQILTLEDAKKELEILNQDKEQNGNIARQRHVVNAYAVGKIAGEEGLFRFQLDDKGKWGNPQLLAKKVKRMDVR
YIYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHIEQDVVSDVTQKNSPFSLKRNSTRNSTNKLIPIAESSNIGYQGFIQRLNALIFQYGIDDVNASAATTVVSSCG
AISKPSKQILTLEDAKKELEILNQDKEQNGNIARQRHVVNAYAVGKIAGEEGLFRFQLDDKGKWGNPQLLAKKVKRMDVR
YIYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 945 bp
>NTDB_id=937129 V5G09_RS02345 WP_048339587.1 451454..452398(+) (pilJ) [Neisseria gonorrhoeae strain WHO_B_2024]
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCCGAGCATATCGAACAGGATGTTGTTTCCGATGTGACGCAAAAAAACTCTCCTTTTTCCTTAAAAAG
GAACAGTACAAGGAACAGTACAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCGGATATCAGGGTTTTATCCAGC
GCCTTAACGCATTGATTTTCCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGGC
GCAATATCGAAACCGAGTAAGCAAATCCTTACTTTAGAAGATGCAAAAAAAGAATTGGAGATTCTGAATCAGGATAAGGA
GCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAAGATTGCCGGTGAGGAAGGTTTGT
TCCGCTTCCAATTGGATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGGTTAAACGTATGGATGTGCGG
TATATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAG
CTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTA
TTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCCGAGCATATCGAACAGGATGTTGTTTCCGATGTGACGCAAAAAAACTCTCCTTTTTCCTTAAAAAG
GAACAGTACAAGGAACAGTACAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCGGATATCAGGGTTTTATCCAGC
GCCTTAACGCATTGATTTTCCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGGC
GCAATATCGAAACCGAGTAAGCAAATCCTTACTTTAGAAGATGCAAAAAAAGAATTGGAGATTCTGAATCAGGATAAGGA
GCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAAGATTGCCGGTGAGGAAGGTTTGT
TCCGCTTCCAATTGGATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGGTTAAACGTATGGATGTGCGG
TATATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAG
CTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTA
TTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
91.401 |
100 |
0.914 |