Detailed information NTG0935476

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: ACD268_RS10085
• Genome accession: NZ_CP168299
• Coordinates: 1960065..1960469 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588024.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain FC1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1955065..1965469

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACD268_RS10045 (ACD268_10045)	rnpA	1955479..1955850 (-)	372	WP_000739246.1	ribonuclease P protein component	-
ACD268_RS10050 (ACD268_10050)	-	1955867..1955998 (-)	132	WP_000768904.1	hypothetical protein	-
ACD268_RS10055 (ACD268_10055)	-	1955999..1957189 (-)	1191	WP_330789279.1	acetate kinase	-
ACD268_RS10060 (ACD268_10060)	comGH	1957240..1958193 (-)	954	WP_330789278.1	class I SAM-dependent methyltransferase	Machinery gene
ACD268_RS10065 (ACD268_10065)	-	1958254..1958848 (-)	595	Protein_1958	class I SAM-dependent methyltransferase	-
ACD268_RS10070 (ACD268_10070)	comGG/cglG	1958985..1959398 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
ACD268_RS10075 (ACD268_10075)	comGF/cglF	1959376..1959837 (-)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACD268_RS10080 (ACD268_10080)	comGE/cglE	1959800..1960102 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
ACD268_RS10085 (ACD268_10085)	comGD/cglD	1960065..1960469 (-)	405	WP_000588024.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACD268_RS10090 (ACD268_10090)	comGC/cglC	1960462..1960728 (-)	267	WP_050129046.1	competence type IV pilus major pilin ComGC	Machinery gene
ACD268_RS10095 (ACD268_10095)	-	1960730..1960987 (-)	258	WP_000698512.1	hypothetical protein	-
ACD268_RS10100 (ACD268_10100)	lytA	1961219..1962175 (-)	957	WP_373381835.1	N-acetylmuramoyl-L-alanine amidase LytA	-
ACD268_RS10105 (ACD268_10105)	-	1962179..1962511 (-)	333	WP_001186206.1	phage holin	-
ACD268_RS10110 (ACD268_10110)	-	1962515..1962931 (-)	417	WP_001165344.1	phage holin family protein	-
ACD268_RS10115 (ACD268_10115)	-	1962941..1963291 (-)	351	WP_000852249.1	hypothetical protein	-
ACD268_RS10120 (ACD268_10120)	-	1963294..1963497 (-)	204	WP_001091107.1	hypothetical protein	-
ACD268_RS10125 (ACD268_10125)	-	1963478..1963594 (-)	117	Protein_1970	dihydrodipicolinate reductase	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14666.79 Da
• Isoelectric Point: 10.0319

>NTDB_id=935476 ACD268_RS10085 WP_000588024.1 1960065..1960469(-) (comGD/cglD) [Streptococcus pneumoniae strain FC1]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNSDGQTISNGSQKLPV
PKGIQAPSDQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=935476 ACD268_RS10085 WP_000588024.1 1960065..1960469(-) (comGD/cglD) [Streptococcus pneumoniae strain FC1]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTCAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGATCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae Rx1	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae D39	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae R6	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comGD	Streptococcus gordonii str. Challis substr. CH1	59.843	94.776	0.567
comGD	Streptococcus mutans UA140	49.219	95.522	0.47
comGD	Streptococcus mutans UA159	49.219	95.522	0.47