Detailed information NTG0935233

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: ACD269_RS06285
• Genome accession: NZ_CP168260
• Coordinates: 1221990..1222631 (-)
• Length: 213 a.a.
• NCBI ID: WP_000151482.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain FC2
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1216990..1227631

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACD269_RS06260 (ACD269_06260)	-	1217861..1218103 (+)	243	WP_000710764.1	type B 50S ribosomal protein L31	-
ACD269_RS06265 (ACD269_06265)	-	1218160..1218378 (-)	219	WP_000028151.1	hypothetical protein	-
ACD269_RS06270 (ACD269_06270)	-	1218375..1219231 (-)	857	Protein_1238	IS630 family transposase	-
ACD269_RS06275 (ACD269_06275)	gdhA	1219955..1221301 (+)	1347	WP_000199560.1	NADP-specific glutamate dehydrogenase	-
ACD269_RS06280 (ACD269_06280)	-	1221807..1221977 (-)	171	WP_000711943.1	hypothetical protein	-
ACD269_RS06285 (ACD269_06285)	comA	1221990..1222631 (-)	642	WP_000151482.1	ATP-binding cassette domain-containing protein	Regulator
ACD269_RS06290 (ACD269_06290)	-	1222756..1222943 (-)	188	Protein_1242	hypothetical protein	-
ACD269_RS06295 (ACD269_06295)	-	1222904..1223500 (+)	597	WP_000547415.1	transposase	-
ACD269_RS06300 (ACD269_06300)	-	1223650..1223844 (-)	195	Protein_1244	ROK family protein	-
ACD269_RS06305 (ACD269_06305)	-	1223871..1224788 (-)	918	Protein_1245	dihydrodipicolinate synthase family protein	-
ACD269_RS06310 (ACD269_06310)	-	1224820..1225227 (-)	408	WP_000216067.1	cytidine deaminase	-
ACD269_RS06315 (ACD269_06315)	-	1225515..1226003 (-)	489	WP_000872894.1	phosphatidylglycerophosphatase A	-
ACD269_RS06320 (ACD269_06320)	-	1226008..1227417 (-)	1410	WP_000773464.1	hypothetical protein	-
ACD269_RS06325 (ACD269_06325)	-	1227427..1227624 (-)	198	WP_256864594.1	hypothetical protein	-

Sequence

Protein

• Length: 213 a.a.
• Molecular weight: 23548.33 Da
• Isoelectric Point: 9.2387

>NTDB_id=935233 ACD269_RS06285 WP_000151482.1 1221990..1222631(-) (comA) [Streptococcus pneumoniae strain FC2]
MTIESGQRIALVGQPGSGKSTLSKIPSGLYKIDTGKVLFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKHEV
TSQKIEEVCKAVQIYDEIMAMPMKFNTIISEMGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEERITKYIKS
QGCTQIIVAHRLSTIKDADIIFVMKGGKIVESGNHKYLMELGGEYYSLYTKRK

Nucleotide

• Length: 642 bp

>NTDB_id=935233 ACD269_RS06285 WP_000151482.1 1221990..1222631(-) (comA) [Streptococcus pneumoniae strain FC2]
TTGACTATTGAGTCAGGACAGAGAATTGCACTAGTCGGTCAACCGGGGTCAGGAAAAAGTACATTATCAAAAATACCATC
AGGATTATATAAGATTGATACAGGAAAAGTTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAATATTAAGTC
AAAATTTAGGAGTAGTTCCACAGGATTCGTTTTTATTGAACCGAAGTATTCTTGATAATATAACTTTAAAGCACGAAGTT
ACTTCACAAAAGATAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAATTTAATAC
TATAATCTCAGAGATGGGTTCAAATATTTCAGGTGGTCAAAGACAACGGATAGCACTGGCACGTGCATTAATAAATAATC
CTAGTATTGTAATTTTAGATGAAGCAACTAGTGCTTTAGACACTATTAATGAGGAAAGAATAACAAAGTATATAAAAAGT
CAGGGCTGTACTCAAATAATTGTAGCTCATAGATTGTCAACGATTAAGGATGCGGATATTATTTTTGTAATGAAAGGTGG
TAAGATTGTTGAGTCAGGAAATCATAAGTACTTAATGGAGCTTGGTGGAGAGTACTACAGCTTATATACAAAAAGGAAAT
GA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (1-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	42.857	98.592	0.423
comA	Streptococcus mitis SK321	42.381	98.592	0.418
comA	Streptococcus gordonii str. Challis substr. CH1	41.981	99.531	0.418
comA/nlmT	Streptococcus mutans UA159	41.981	99.531	0.418
comA	Streptococcus pneumoniae R6	41.429	98.592	0.408
comA	Streptococcus pneumoniae Rx1	41.429	98.592	0.408
comA	Streptococcus pneumoniae D39	41.429	98.592	0.408
comA	Streptococcus pneumoniae TIGR4	40.476	98.592	0.399
rcrQ	Streptococcus mutans UA159	36.62	100	0.366