Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   V5G22_RS05210 Genome accession   NZ_CP144920
Coordinates   1022390..1023343 (-) Length   317 a.a.
NCBI ID   WP_061565963.1    Uniprot ID   A0A8B5YEJ1
Organism   Bacillus licheniformis strain CP26     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1017390..1028343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G22_RS05190 (V5G22_05190) - 1018146..1019567 (+) 1422 WP_003178944.1 MDR family MFS transporter -
  V5G22_RS05195 (V5G22_05195) - 1019736..1020683 (-) 948 WP_003178942.1 siderophore ABC transporter substrate-binding protein -
  V5G22_RS05200 (V5G22_05200) - 1020698..1021456 (-) 759 WP_003178940.1 ABC transporter ATP-binding protein -
  V5G22_RS05205 (V5G22_05205) - 1021456..1022400 (-) 945 WP_003178939.1 iron chelate uptake ABC transporter family permease subunit -
  V5G22_RS05210 (V5G22_05210) ceuB 1022390..1023343 (-) 954 WP_061565963.1 ABC transporter permease Machinery gene
  V5G22_RS05215 (V5G22_05215) - 1023617..1024978 (+) 1362 WP_009330182.1 aspartate kinase -
  V5G22_RS05220 (V5G22_05220) - 1025114..1026013 (+) 900 WP_009330183.1 methyl-accepting chemotaxis protein -
  V5G22_RS05225 (V5G22_05225) - 1026028..1026819 (+) 792 WP_224990982.1 methyl-accepting chemotaxis protein -
  V5G22_RS05230 (V5G22_05230) - 1026852..1028279 (-) 1428 WP_009330185.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35245.68 Da        Isoelectric Point: 10.1282

>NTDB_id=935181 V5G22_RS05210 WP_061565963.1 1022390..1023343(-) (ceuB) [Bacillus licheniformis strain CP26]
MKLRYLLLMLIILSFSSIFIGVKELSPLDLFRFNEDEIQTLYISRIPRLISIVLAGMSLSICGLIMQQLTRNKFVSPTTA
GTMDWARLGVIIAIVLFSSAGIVVKILFAFVFALFGSFLFVKILDRIKFKDAIFIPLVGMMLGSVVSAIYTFMAYQYNII
QNVNAWFEGNFSLVMKGRYELLFLSIPLVIIAYLFANKFTLAGMGESFSINLGLKYKRVVNIGLIIVSIISSVVILTIGT
LPFLGLIIPNIVSIYRGDHLKNSLPHTAVLGAVFVLFCDIAGRLVIYPYEISVGLMVGIIGSGVFLYLLLRRKAYAS

Nucleotide


Download         Length: 954 bp        

>NTDB_id=935181 V5G22_RS05210 WP_061565963.1 1022390..1023343(-) (ceuB) [Bacillus licheniformis strain CP26]
ATGAAATTACGATACCTATTGCTAATGCTCATCATTCTTTCATTCAGCTCGATATTCATCGGCGTTAAGGAGCTTTCGCC
TCTTGACCTTTTCCGCTTTAATGAGGACGAAATTCAAACGCTTTACATAAGCAGAATCCCGCGCTTGATCAGCATCGTGC
TTGCGGGAATGAGCTTGAGCATCTGCGGGCTGATCATGCAGCAGCTGACGCGCAATAAATTTGTTTCACCAACCACCGCT
GGAACGATGGATTGGGCTCGGCTCGGCGTGATCATTGCGATCGTGCTTTTTTCGTCTGCAGGGATAGTAGTCAAAATACT
GTTTGCCTTTGTTTTTGCACTGTTTGGCAGCTTTTTGTTCGTCAAAATTTTGGACAGAATCAAGTTCAAAGATGCGATTT
TCATCCCTCTCGTCGGAATGATGCTCGGGAGCGTTGTCAGCGCCATCTATACTTTCATGGCTTATCAGTACAATATTATT
CAAAACGTCAATGCATGGTTTGAAGGGAATTTTTCGCTGGTCATGAAGGGGAGGTATGAGCTCTTATTTCTGAGTATACC
GCTCGTTATCATTGCCTATCTGTTCGCCAATAAATTCACGTTGGCCGGGATGGGGGAGTCATTTTCCATCAATCTTGGTT
TGAAATACAAGCGGGTGGTCAATATCGGGCTGATCATCGTATCTATTATTTCGTCCGTCGTCATCCTGACGATCGGCACG
CTTCCCTTTTTGGGATTGATCATCCCGAACATCGTGTCCATTTACAGGGGAGATCATTTGAAAAACAGCCTGCCTCACAC
GGCGGTTCTCGGAGCCGTTTTCGTCTTGTTTTGCGATATAGCGGGACGTCTCGTCATTTACCCGTACGAAATTTCGGTTG
GTTTGATGGTCGGCATCATCGGGAGCGGCGTTTTTCTTTACTTGCTTTTAAGGAGAAAAGCCTATGCGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A8B5YEJ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.266

99.685

0.511