Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   U4D54_RS06460 Genome accession   NZ_CP143639
Coordinates   1302721..1303617 (-) Length   298 a.a.
NCBI ID   WP_037558331.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain M81.1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1297721..1308617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U4D54_RS06445 (U4D54_06445) - 1298516..1299706 (-) 1191 WP_046308947.1 DUF4064 domain-containing protein -
  U4D54_RS06450 (U4D54_06450) - 1299795..1301786 (-) 1992 WP_046308945.1 ABC transporter permease -
  U4D54_RS06455 (U4D54_06455) - 1301788..1302537 (-) 750 WP_046308943.1 ABC transporter ATP-binding protein -
  U4D54_RS06460 (U4D54_06460) braS 1302721..1303617 (-) 897 WP_037558331.1 sensor histidine kinase Regulator
  U4D54_RS06465 (U4D54_06465) braR 1303620..1304288 (-) 669 WP_037558332.1 response regulator transcription factor Regulator
  U4D54_RS06470 (U4D54_06470) - 1304318..1304482 (-) 165 WP_162838897.1 hypothetical protein -
  U4D54_RS06475 (U4D54_06475) - 1304666..1304836 (-) 171 WP_162838896.1 hypothetical protein -
  U4D54_RS06480 (U4D54_06480) - 1305235..1306710 (+) 1476 WP_037570986.1 alkaline phosphatase -
  U4D54_RS06485 (U4D54_06485) - 1306800..1307747 (-) 948 WP_037558334.1 LCP family protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34639.27 Da        Isoelectric Point: 6.4975

>NTDB_id=930176 U4D54_RS06460 WP_037558331.1 1302721..1303617(-) (braS) [Staphylococcus haemolyticus strain M81.1]
MLKAFIKSILNEIIIIITFILLFLLIFFLFNLPLSAFLLGAGIMLFIMIIYWLVQLSGFKEQVQMADTIHELEHELQQVK
SDQTEYQANVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVKINDL
VRPLIMKYSIQFIDQKTKIHYERCEDEVLTDAQWCSIMIEQILNNALKYARGKDIWITFDQQQHVLTIRDNGVGISQADL
PKIFDKGYSGYNGRLNANSSGIGLFIVKYISQHLHHLVDVQSELNKGTAFSIYFPKNN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=930176 U4D54_RS06460 WP_037558331.1 1302721..1303617(-) (braS) [Staphylococcus haemolyticus strain M81.1]
ATGCTGAAAGCTTTTATTAAATCAATATTAAATGAAATCATTATAATCATCACATTTATATTGCTATTCTTACTTATCTT
CTTTCTATTTAATCTGCCATTGAGTGCGTTTCTATTAGGCGCCGGAATTATGCTATTCATCATGATAATTTATTGGTTAG
TTCAATTAAGTGGATTTAAAGAACAAGTACAGATGGCAGATACTATTCATGAACTAGAGCATGAATTGCAACAGGTAAAA
AGTGATCAGACTGAATATCAAGCTAATGTGGAGAATTACTTCTTAACATGGGTTCATCAAATGAAGACACCTATTACAGC
ATCTAAATTGTTGTTAGAGCGTAATGAAGATAATGTCGTCAATCGAGTGCGGCAAGAAATTATTCAAATTGATAATTATA
CAAGTTTAGCGTTAAGTTATTTAAAATTGATGAACCAGGAAACGGATATGTCCTTTTCAAAAGTGAAGATTAATGACCTT
GTCCGTCCATTAATTATGAAATATTCTATTCAATTTATTGATCAGAAGACAAAGATTCATTATGAACGGTGTGAGGATGA
AGTTCTGACTGATGCACAATGGTGTTCAATAATGATTGAACAGATTCTAAATAATGCATTGAAGTATGCACGAGGTAAGG
ACATTTGGATTACGTTTGACCAACAACAGCATGTATTAACTATTCGTGATAATGGCGTCGGTATTAGTCAAGCTGACTTA
CCGAAGATCTTTGATAAAGGCTATTCAGGATATAATGGTCGATTGAATGCTAATTCATCAGGCATTGGATTGTTTATTGT
TAAATATATATCGCAACATTTACATCATCTTGTAGATGTACAGTCTGAGTTGAACAAAGGTACGGCATTTAGTATTTATT
TCCCGAAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

62.671

97.987

0.614