Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   U4D54_RS06465 Genome accession   NZ_CP143639
Coordinates   1303620..1304288 (-) Length   222 a.a.
NCBI ID   WP_037558332.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain M81.1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1298620..1309288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U4D54_RS06450 (U4D54_06450) - 1299795..1301786 (-) 1992 WP_046308945.1 ABC transporter permease -
  U4D54_RS06455 (U4D54_06455) - 1301788..1302537 (-) 750 WP_046308943.1 ABC transporter ATP-binding protein -
  U4D54_RS06460 (U4D54_06460) braS 1302721..1303617 (-) 897 WP_037558331.1 sensor histidine kinase Regulator
  U4D54_RS06465 (U4D54_06465) braR 1303620..1304288 (-) 669 WP_037558332.1 response regulator transcription factor Regulator
  U4D54_RS06470 (U4D54_06470) - 1304318..1304482 (-) 165 WP_162838897.1 hypothetical protein -
  U4D54_RS06475 (U4D54_06475) - 1304666..1304836 (-) 171 WP_162838896.1 hypothetical protein -
  U4D54_RS06480 (U4D54_06480) - 1305235..1306710 (+) 1476 WP_037570986.1 alkaline phosphatase -
  U4D54_RS06485 (U4D54_06485) - 1306800..1307747 (-) 948 WP_037558334.1 LCP family protein -
  U4D54_RS06490 (U4D54_06490) wecB 1307842..1308981 (-) 1140 WP_037558335.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25672.47 Da        Isoelectric Point: 4.5652

>NTDB_id=930177 U4D54_RS06465 WP_037558332.1 1303620..1304288(-) (braR) [Staphylococcus haemolyticus strain M81.1]
MKVFIVEDDFVIAESLEQELSKWNYEVIVAKQFDNIIDVFNANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEITVKDCKLVVDEATLYHQDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=930177 U4D54_RS06465 WP_037558332.1 1303620..1304288(-) (braR) [Staphylococcus haemolyticus strain M81.1]
ATGAAAGTATTCATCGTGGAAGATGATTTTGTCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTAATGCAAATCAACCACAACTCGTGTTGCTCGATATCAATC
TACCGACGTTCAATGGTTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTGCCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCGATTCAAATGGGCGGCGATGATTTTATCGAGAAACCATTTAATTTATCGTTAAC
GGTAACTAAGATTCAAGCACTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAATTACAGTTAAAGACTGCA
AACTTGTTGTAGATGAAGCAACGCTATATCACCAAGACGAATCGGTTCAATTATCTTTTACTGAATTACAAATTTTAAAT
ATGTTGTTTCGTAATGAAGGTAAGTATGTTAGCCGTACAGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

99.55

0.784