Detailed information NTG0928332

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: U6151_RS20595
• Genome accession: NZ_CP143257
• Coordinates: 4318412..4319914 (-)
• Length: 500 a.a.
• NCBI ID: WP_043579279.1
• Uniprot ID: -
• Organism: Chromobacterium subtsugae isolate delta-vioS
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 4313412..4324914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U6151_RS20570 (U6151_20580)	cyoA	4314810..4315703 (-)	894	WP_230623425.1	ubiquinol oxidase subunit II	-
U6151_RS20585 (U6151_20595)	-	4316950..4317561 (-)	612	WP_043579277.1	thiol:disulfide interchange protein DsbA/DsbL	-
U6151_RS20590 (U6151_20600)	-	4317590..4318348 (-)	759	WP_043579278.1	SPOR domain-containing protein	-
U6151_RS20595 (U6151_20605)	comM	4318412..4319914 (-)	1503	WP_043579279.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
U6151_RS20600 (U6151_20610)	-	4319921..4320208 (-)	288	WP_043579280.1	accessory factor UbiK family protein	-
U6151_RS20605 (U6151_20615)	glnK	4320546..4320884 (+)	339	WP_021478498.1	P-II family nitrogen regulator	-
U6151_RS20610 (U6151_20620)	-	4320912..4322222 (+)	1311	WP_043579281.1	ammonium transporter	-
U6151_RS20615 (U6151_20625)	-	4322344..4322763 (-)	420	WP_043579282.1	ClpXP protease specificity-enhancing factor	-
U6151_RS20620 (U6151_20630)	-	4322773..4323375 (-)	603	WP_043579283.1	glutathione S-transferase N-terminal domain-containing protein	-
U6151_RS20625 (U6151_20635)	-	4323526..4324290 (-)	765	WP_043579284.1	cytochrome c1	-

Sequence

Protein

• Length: 500 a.a.
• Molecular weight: 52776.52 Da
• Isoelectric Point: 8.0879

>NTDB_id=928332 U6151_RS20595 WP_043579279.1 4318412..4319914(-) (comM) [Chromobacterium subtsugae isolate delta-vioS]
MTLAVVASRALSGLDAPEVAVEVHLANGLPAFNIVGLPDTEVKESRDRVRAAILTSGFEFPARKITVNLAPADLPKDSGR
FDLPIAIGILLASGQVQNPDISRYEFAGELALSGAVRPVRGALAMACQCHAARRAFVLPAASAAEAAVVAEAQIYGVRSL
LEACAFLNGLQTLQPSVPADGGAWPNYPDLQDVKGQSAARGALEIAAAGGHSLLLMGPPGTGKSMLAARLPGLLPRLSEQ
EALESAALLSLGSQGFLASNWRLRPFRAPHHTASAVALVGGGSDPRPGEISLAHHGVLFLDELPEFDRRVLEVLREPMES
GVIHISRAARQASFPARFQLVAAMNPCPCGYHGHPSGRCQCTPEQVGRYRGKISGPLLDRIDLHIEVPALTAAELQSASP
GESSEQVRLRVHAARTCQLGRQGGLNSALQGAELERHCEASADALAVLGKALQQLGLSARAYHRILRVSRTIADLQGEAK
IGRSHVLQAIQLRRVMQGNA

Nucleotide

• Length: 1503 bp

>NTDB_id=928332 U6151_RS20595 WP_043579279.1 4318412..4319914(-) (comM) [Chromobacterium subtsugae isolate delta-vioS]
ATGACATTGGCGGTGGTGGCGAGCAGGGCGCTGTCCGGGCTTGACGCCCCGGAGGTGGCCGTCGAGGTCCACCTCGCCAA
TGGCCTGCCGGCGTTCAATATCGTCGGCTTGCCCGATACCGAGGTCAAGGAAAGCCGCGACCGCGTGCGCGCCGCCATCT
TGACCTCGGGCTTCGAATTTCCCGCGCGCAAGATCACGGTCAATCTGGCCCCGGCCGATCTGCCCAAGGATTCCGGCCGT
TTCGACCTGCCGATCGCCATCGGCATCCTGCTGGCGTCCGGCCAAGTGCAAAATCCTGACATTTCCCGCTATGAATTCGC
CGGCGAGCTGGCGCTGAGCGGCGCCGTGCGCCCGGTGCGCGGCGCGTTGGCGATGGCCTGCCAGTGCCATGCGGCCCGCC
GCGCCTTCGTGCTGCCGGCTGCCAGCGCGGCAGAGGCCGCGGTGGTGGCGGAGGCGCAGATTTACGGGGTGCGTTCGCTG
CTGGAGGCCTGCGCGTTTCTCAACGGGCTGCAAACCTTGCAGCCCTCGGTTCCGGCTGACGGCGGAGCCTGGCCGAACTA
TCCGGATCTGCAGGATGTCAAAGGCCAGTCAGCGGCTCGCGGCGCGCTGGAGATCGCGGCCGCCGGCGGTCACAGCCTGC
TGCTGATGGGGCCGCCGGGCACCGGCAAGTCGATGCTGGCGGCGCGGCTGCCTGGCTTGTTGCCGCGGCTGTCCGAACAG
GAGGCGCTGGAGTCCGCTGCGCTGCTGTCGTTGGGCTCGCAAGGGTTTCTGGCCTCGAACTGGCGTTTGCGTCCGTTTCG
GGCGCCGCACCACACCGCTTCCGCGGTGGCGCTGGTGGGCGGCGGCAGCGACCCGCGGCCTGGCGAGATCAGCCTGGCGC
ACCACGGCGTGCTGTTTCTCGACGAGTTGCCGGAGTTCGACCGCCGCGTGCTGGAAGTGCTGCGCGAGCCGATGGAAAGC
GGGGTGATCCATATCTCGCGCGCGGCGCGCCAGGCCAGCTTTCCGGCGCGCTTCCAGCTGGTGGCGGCGATGAACCCATG
CCCCTGCGGCTATCATGGGCACCCATCGGGGCGCTGCCAGTGCACGCCCGAGCAGGTGGGGCGATATCGCGGTAAAATCT
CCGGCCCCTTGCTGGACAGAATCGACCTGCATATAGAGGTGCCGGCGCTGACGGCGGCCGAATTGCAGTCGGCCAGTCCG
GGCGAAAGCAGCGAGCAGGTGAGGTTGCGTGTGCATGCCGCCAGGACTTGCCAGCTGGGACGCCAGGGCGGCCTGAATTC
GGCCTTGCAAGGCGCGGAGCTGGAGCGGCACTGCGAGGCGAGCGCGGATGCCTTGGCCGTGCTGGGCAAGGCTTTGCAGC
AGCTTGGCTTGTCGGCGCGCGCTTATCATCGGATACTGCGGGTTTCGCGCACCATCGCGGACTTGCAAGGCGAGGCGAAG
ATAGGCCGCAGCCATGTATTGCAGGCGATCCAGCTCCGACGCGTGATGCAGGGCAACGCCTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

• Subunit ChlI of Mg-chelatase (ChlI) (21-141)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	54.509	99.8	0.544
comM	Vibrio campbellii strain DS40M4	52.727	99	0.522
comM	Haemophilus influenzae Rd KW20	51.503	99.8	0.514
comM	Glaesserella parasuis strain SC1401	50.701	99.8	0.506
comM	Legionella pneumophila str. Paris	50.1	99.8	0.5
comM	Legionella pneumophila strain ERS1305867	50.1	99.8	0.5
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.618	100	0.458