Detailed information NTG0927560

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: VP466_RS04710
• Genome accession: NZ_CP142895
• Coordinates: 996879..997937 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain B20AB10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 991879..1002937

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VP466_RS04695 (VP466_04700)	-	992984..993316 (+)	333	WP_000169594.1	hypothetical protein	-
VP466_RS04700 (VP466_04705)	-	993319..994143 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
VP466_RS04705 (VP466_04710)	ponA	994161..996716 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
VP466_RS04710 (VP466_04715)	pilM	996879..997937 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
VP466_RS04715 (VP466_04720)	pilN	997937..998578 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
VP466_RS04720 (VP466_04725)	pilO	998575..999315 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
VP466_RS04725 (VP466_04730)	pilP	999326..999853 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
VP466_RS04730 (VP466_04735)	pilQ	999921..1002083 (+)	2163	WP_033503048.1	type IV pilus secretin PilQ family protein	Machinery gene
VP466_RS04735 (VP466_04740)	aroK	1002095..1002664 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=927560 VP466_RS04710 WP_002014066.1 996879..997937(+) (pilM) [Acinetobacter baumannii strain B20AB10]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=927560 VP466_RS04710 WP_002014066.1 996879..997937(+) (pilM) [Acinetobacter baumannii strain B20AB10]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423