Detailed information NTG0926717

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: VSX70_RS01740
• Genome accession: NZ_CP142771
• Coordinates: 372815..374965 (+)
• Length: 716 a.a.
• NCBI ID: WP_063204064.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain VHProbi M25
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 367815..379965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VSX70_RS01705 (VSX70_01705)	-	367957..368169 (-)	213	WP_171785653.1	hypothetical protein	-
VSX70_RS01710 (VSX70_01710)	-	368239..369411 (+)	1173	WP_226319713.1	sensor histidine kinase	-
VSX70_RS01715 (VSX70_01715)	-	369412..370155 (+)	744	WP_063486822.1	response regulator transcription factor	-
VSX70_RS01720 (VSX70_01720)	-	370274..371017 (+)	744	WP_063204018.1	response regulator transcription factor	-
VSX70_RS01725 (VSX70_01725)	-	371323..371823 (-)	501	WP_225868584.1	CPBP family intramembrane glutamic endopeptidase	-
VSX70_RS01730 (VSX70_01730)	plnF	372195..372353 (-)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
VSX70_RS01735 (VSX70_01735)	plnE	372378..372548 (-)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
VSX70_RS01740 (VSX70_01740)	comA	372815..374965 (+)	2151	WP_063204064.1	peptide cleavage/export ABC transporter	Regulator
VSX70_RS01745 (VSX70_01745)	-	374981..376357 (+)	1377	WP_057136851.1	HlyD family secretion protein	-
VSX70_RS01750 (VSX70_01750)	-	376447..377136 (+)	690	WP_063204065.1	CPBP family intramembrane glutamic endopeptidase	-
VSX70_RS01755 (VSX70_01755)	-	377204..377872 (+)	669	WP_063204066.1	CPBP family intramembrane glutamic endopeptidase	-
VSX70_RS01760 (VSX70_01760)	-	377959..378639 (+)	681	WP_003641991.1	CPBP family intramembrane glutamic endopeptidase	-
VSX70_RS01765 (VSX70_01765)	-	378810..379409 (+)	600	WP_226319714.1	CPBP family intramembrane glutamic endopeptidase	-
VSX70_RS01770 (VSX70_01770)	-	379547..379750 (+)	204	WP_027821496.1	hypothetical protein	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 80051.80 Da
• Isoelectric Point: 6.7530

>NTDB_id=926717 VSX70_RS01740 WP_063204064.1 372815..374965(+) (comA) [Lactiplantibacillus plantarum strain VHProbi M25]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFDVQDLPL
PFIVHVTKNRDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKIAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=926717 VSX70_RS01740 WP_063204064.1 372815..374965(+) (comA) [Lactiplantibacillus plantarum strain VHProbi M25]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGATGTCCAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATAGGGATCTACAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACGCATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATTTGTGGGTCGTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCTAATAATATGCACAGTACATTGGCAGTGGTGGCAATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCCATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCAAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAGAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTGGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGATTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAAAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (166-436)

• ABC transporter (ABC_tran) (498-648)

• Peptidase C39 family (Peptidase_C39) (5-140)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.766	99.581	0.585
comA	Streptococcus pneumoniae Rx1	58.485	99.581	0.582
comA	Streptococcus pneumoniae D39	58.485	99.581	0.582
comA	Streptococcus pneumoniae R6	58.485	99.581	0.582
comA	Streptococcus pneumoniae TIGR4	58.345	99.581	0.581
comA	Streptococcus mitis SK321	58.205	99.581	0.58
comA	Streptococcus gordonii str. Challis substr. CH1	57.103	100	0.573
comA/nlmT	Streptococcus mutans UA159	54.596	100	0.547