Detailed information NTG0925350

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: VKP36_RS00330
• Genome accession: NZ_CP142357
• Coordinates: 53089..54000 (+)
• Length: 303 a.a.
• NCBI ID: WP_020904818.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain AW-534
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 48089..59000

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VKP36_RS00310 (VKP36_00310)	purE	48675..49166 (+)	492	WP_023079042.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
VKP36_RS00315 (VKP36_00315)	purK	49153..50226 (+)	1074	WP_326624897.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
VKP36_RS00320 (VKP36_00320)	-	50228..51646 (+)	1419	WP_011888524.1	hypothetical protein	-
VKP36_RS00325 (VKP36_00325)	purB	51666..52958 (+)	1293	WP_030126529.1	adenylosuccinate lyase	-
VKP36_RS00330 (VKP36_00330)	comR	53089..54000 (+)	912	WP_020904818.1	helix-turn-helix domain-containing protein	Regulator
VKP36_RS00335 (VKP36_00335)	comS	54091..54189 (+)	99	WP_020833188.1	quorum-sensing system DWW-type pheromone	Regulator
VKP36_RS00340 (VKP36_00340)	ruvB	54220..55218 (+)	999	WP_002986679.1	Holliday junction branch migration DNA helicase RuvB	-
VKP36_RS00345 (VKP36_00345)	-	55356..55793 (+)	438	WP_002994668.1	low molecular weight protein-tyrosine-phosphatase	-
VKP36_RS00350 (VKP36_00350)	-	55816..56217 (+)	402	WP_002986671.1	MORN repeat-containing protein	-
VKP36_RS00355 (VKP36_00355)	-	56214..57989 (+)	1776	WP_326624902.1	acyltransferase family protein	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 35887.54 Da
• Isoelectric Point: 4.9349

>NTDB_id=925350 VKP36_RS00330 WP_020904818.1 53089..54000(+) (comR) [Streptococcus pyogenes strain AW-534]
MLEHFGGKVKVLRLEKRISREDLCGDESELSVRQLARIELGQSIPSLSKVIFIAKALNVSVGYLTDGADLELPKRYKELK
YLILRTPTYMDDGKLQVREEQFDEIFEDYYDKLPEEEKVAVDIIQAKFEVYQTGDINFGYSILKEFLPQLKRKSIYNLNE
LLLIDLYLIILVVSHFSDDIFDAQFYEEITESMLKQHNNLSLEDLFLLNNILLSCADTYIRLKMFGRLKETLQLSHFIMS
TIQDFQKMPMYCMYEWKLSIFYLKDINRARNYFEQSILFTQMTGDTYLVQKLRGEWNKDIHYI

Nucleotide

• Length: 912 bp

>NTDB_id=925350 VKP36_RS00330 WP_020904818.1 53089..54000(+) (comR) [Streptococcus pyogenes strain AW-534]
ATGTTAGAACATTTTGGTGGAAAAGTAAAAGTGTTAAGACTTGAAAAGAGGATTAGTCGCGAGGACTTGTGTGGGGATGA
GTCTGAACTTTCTGTTCGTCAATTAGCACGGATAGAACTAGGTCAATCCATACCAAGTTTAAGTAAGGTTATTTTTATTG
CAAAAGCCTTAAACGTTAGTGTCGGTTACTTAACTGATGGTGCTGATTTAGAACTACCTAAGCGTTACAAAGAATTAAAA
TACCTTATCTTAAGGACACCAACTTACATGGATGATGGAAAATTACAAGTACGAGAAGAGCAGTTTGATGAAATTTTTGA
GGATTATTATGATAAATTACCAGAGGAAGAGAAAGTTGCTGTTGATATTATCCAAGCAAAATTTGAAGTTTATCAAACCG
GAGATATTAATTTCGGATATAGTATTTTAAAAGAATTTCTACCACAGCTAAAAAGAAAATCTATCTATAATTTAAATGAA
TTATTACTTATAGATTTGTATTTGATTATTCTGGTAGTTTCTCATTTTTCAGATGATATATTTGATGCACAGTTTTATGA
AGAAATAACAGAGAGCATGTTAAAACAACACAATAATTTATCATTGGAAGATTTATTTTTACTGAATAATATCTTATTAT
CTTGTGCGGACACTTATATTCGTTTGAAGATGTTCGGTCGTCTAAAAGAAACATTACAACTTAGCCACTTTATAATGTCA
ACTATTCAAGATTTTCAAAAAATGCCTATGTATTGTATGTATGAATGGAAGCTATCTATTTTTTATTTGAAAGATATTAA
CCGAGCACGGAATTACTTTGAACAGTCTATTTTATTTACTCAAATGACAGGAGATACATATTTAGTTCAAAAATTACGGG
GAGAATGGAATAAAGATATTCATTATATTTAA

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (73-296)

• Helix-turn-helix (HTH_3) (12-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus pyogenes MGAS315	99.34	100	0.993
comR	Streptococcus pyogenes MGAS8232	58.472	99.34	0.581
comR	Streptococcus mutans UA159	47.157	98.68	0.465
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	46.441	97.36	0.452
comR	Streptococcus suis P1/7	37.374	98.02	0.366
comR	Streptococcus suis 05ZYH33	37.374	98.02	0.366