Detailed information NTG0920871

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LLE68_RS20255
• Genome accession: NZ_CP142005
• Coordinates: 4596709..4598229 (+)
• Length: 506 a.a.
• NCBI ID: WP_040941986.1
• Uniprot ID: -
• Organism: Xanthomonas campestris pv. barbareae strain NCPPB 983
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 4591709..4603229

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLE68_RS20230 (LLE68_020225)	speE	4592661..4593518 (+)	858	WP_076040051.1	polyamine aminopropyltransferase	-
LLE68_RS20235 (LLE68_020230)	-	4593633..4594418 (-)	786	WP_070693719.1	hypothetical protein	-
LLE68_RS20240 (LLE68_020235)	-	4594948..4595607 (+)	660	WP_162277236.1	RIO1 family regulatory kinase/ATPase	-
LLE68_RS20245 (LLE68_020240)	-	4595892..4596266 (-)	375	WP_275078263.1	P-II family nitrogen regulator	-
LLE68_RS20250 (LLE68_020245)	-	4596421..4596693 (+)	273	WP_011038948.1	accessory factor UbiK family protein	-
LLE68_RS20255 (LLE68_020250)	comM	4596709..4598229 (+)	1521	WP_040941986.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
LLE68_RS20260 (LLE68_020255)	-	4598587..4599096 (+)	510	WP_042595605.1	lipocalin family protein	-
LLE68_RS20265 (LLE68_020260)	-	4599107..4599283 (-)	177	WP_012439469.1	hypothetical protein	-
LLE68_RS20270 (LLE68_020265)	-	4599665..4601224 (+)	1560	WP_076040057.1	EAL domain-containing protein	-
LLE68_RS20275 (LLE68_020270)	-	4601637..4601807 (-)	171	WP_158070205.1	hypothetical protein	-
LLE68_RS20280 (LLE68_020275)	-	4601821..4602942 (-)	1122	WP_076040060.1	acyl-CoA desaturase	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 53881.58 Da
• Isoelectric Point: 8.3405

>NTDB_id=920871 LLE68_RS20255 WP_040941986.1 4596709..4598229(+) (comM) [Xanthomonas campestris pv. barbareae strain NCPPB 983]
MSLALVHSRARVGVHAPEVRVEVHLSGGLPSTQIVGLPEAAVRESRERVRAALLCAQFEFPARRITINLAPADLPKDGGR
FDLPIALGILAASGQIDRQALADYEFLGELALTGELRGIDGVLPAALAAAQAGRRLIVPLANGAEAAIAGHVQAFTARTL
LEVCAALNGTQPPPPAELAIVALGARALPDMADVRGQPHARRALEIAAAGGHHLLLVGSPGCGKTLLASRLPSLLPDASE
AEALETAAITSISGRGLDLARWRQRPYRAPHHTASAVALVGGGTHPRPGEISLAHNGVLFLDELPEWQRQTLEVLREPLE
SGVVTISRAARSMDFPARFQLVAAMNPCPCGWAGDASGRCRCSGDAIRRYRSRISGPLLDRIDLHVDVPRLPPQALRSGA
TGEDSASVRARVAAARERQQARAQVPNARLDQAATDRHCRLGNDDQLLLERAIEHLQLSARSMHRILRVSRTIADLDDSA
DIATRHLTEAIGYRKLDRALDTSSAA

Nucleotide

• Length: 1521 bp

>NTDB_id=920871 LLE68_RS20255 WP_040941986.1 4596709..4598229(+) (comM) [Xanthomonas campestris pv. barbareae strain NCPPB 983]
ATGAGTCTGGCGCTGGTGCACAGCCGTGCCCGCGTGGGAGTGCACGCGCCTGAAGTCCGGGTGGAAGTGCATCTCTCCGG
CGGCCTGCCTTCCACCCAGATCGTGGGCCTGCCCGAGGCCGCGGTGCGCGAGTCACGCGAACGGGTCCGTGCCGCCTTGC
TGTGCGCACAGTTCGAATTCCCCGCACGCCGCATCACCATCAACCTGGCGCCGGCGGATCTACCCAAGGACGGCGGCCGC
TTCGACCTGCCGATCGCGCTCGGCATCCTTGCGGCCAGCGGGCAGATCGACCGCCAGGCCCTGGCCGACTACGAATTCCT
CGGCGAGCTGGCCCTCACCGGCGAGCTGCGCGGCATCGATGGGGTGCTGCCTGCGGCCCTGGCCGCCGCGCAGGCCGGGC
GGCGCCTGATCGTGCCGCTGGCCAACGGCGCCGAGGCGGCCATCGCCGGACACGTGCAGGCCTTTACCGCGCGCACTTTG
CTGGAAGTGTGCGCCGCACTCAACGGCACCCAGCCGCCACCGCCCGCCGAACTAGCCATCGTCGCACTCGGCGCCCGCGC
GCTACCGGACATGGCCGACGTGCGCGGGCAGCCGCATGCACGCCGGGCCCTGGAGATCGCCGCGGCCGGCGGCCATCACC
TGCTGCTGGTCGGCAGCCCTGGCTGCGGCAAGACCCTGCTGGCCTCGCGCCTGCCCAGTCTGTTGCCGGACGCCAGCGAG
GCCGAGGCGCTGGAAACCGCCGCCATCACCTCCATCAGCGGTCGCGGCCTGGACCTGGCGCGCTGGCGGCAACGCCCTTA
TCGCGCCCCGCACCACACCGCCAGCGCGGTGGCGCTGGTGGGCGGTGGCACCCATCCGCGCCCGGGCGAGATCTCATTGG
CGCACAACGGGGTGCTGTTCCTGGACGAGCTGCCCGAGTGGCAGCGGCAGACCCTGGAAGTGCTGCGCGAGCCACTGGAG
TCCGGCGTGGTCACCATCTCGCGGGCCGCGCGCAGCATGGACTTCCCGGCGCGGTTCCAGTTGGTCGCCGCAATGAATCC
CTGCCCGTGCGGCTGGGCCGGCGACGCCAGCGGGCGATGCCGCTGCAGTGGTGACGCCATCCGCCGGTATCGCAGCCGCA
TCTCCGGGCCGCTGCTGGATCGCATCGACCTGCACGTCGACGTGCCGCGCCTGCCGCCGCAGGCACTGCGCAGCGGTGCG
ACCGGCGAGGACAGTGCCAGCGTTCGCGCACGCGTTGCTGCTGCACGCGAACGCCAGCAGGCACGTGCACAGGTGCCCAA
TGCCCGCCTGGACCAGGCCGCCACCGACCGCCACTGCCGGTTGGGCAATGACGATCAGCTGCTGCTGGAACGCGCCATCG
AACATCTGCAGCTGTCCGCGCGCTCGATGCACCGCATCCTGCGCGTCTCGCGCACCATCGCCGATCTCGACGATAGCGCC
GACATCGCCACCCGTCACCTCACCGAAGCCATCGGCTACCGCAAACTCGACCGCGCCCTCGATACCTCCAGCGCCGCATA
A

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-394)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-494)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	55.336	100	0.553
comM	Haemophilus influenzae Rd KW20	54.118	100	0.545
comM	Vibrio campbellii strain DS40M4	53.711	100	0.543
comM	Glaesserella parasuis strain SC1401	53.953	100	0.54
comM	Legionella pneumophila str. Paris	53.187	99.209	0.528
comM	Legionella pneumophila strain ERS1305867	53.187	99.209	0.528
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.047	100	0.46