Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   VO177_RS08920 Genome accession   NZ_CP141828
Coordinates   1775120..1777423 (+) Length   767 a.a.
NCBI ID   WP_021495364.1    Uniprot ID   -
Organism   Bacillus velezensis strain TZS01     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1770120..1782423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VO177_RS08895 (VO177_08895) - 1771673..1772896 (+) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -
  VO177_RS08900 (VO177_08900) - 1772903..1773244 (-) 342 WP_095060627.1 hypothetical protein -
  VO177_RS08905 (VO177_08905) degQ 1773710..1773850 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  VO177_RS08910 (VO177_08910) comQ 1774035..1774994 (+) 960 WP_223204411.1 polyprenyl synthetase family protein Regulator
  VO177_RS08920 (VO177_08920) comP 1775120..1777423 (+) 2304 WP_021495364.1 histidine kinase Regulator
  VO177_RS08925 (VO177_08925) comA 1777504..1778148 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  VO177_RS08930 (VO177_08930) - 1778170..1778553 (+) 384 WP_007613430.1 hotdog fold thioesterase -
  VO177_RS08935 (VO177_08935) mnhG 1778593..1778967 (-) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  VO177_RS08940 (VO177_08940) - 1778951..1779235 (-) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  VO177_RS08945 (VO177_08945) - 1779235..1779711 (-) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  VO177_RS08950 (VO177_08950) - 1779717..1781198 (-) 1482 WP_021495363.1 Na+/H+ antiporter subunit D -
  VO177_RS08955 (VO177_08955) - 1781191..1781532 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  VO177_RS08960 (VO177_08960) - 1781532..1781963 (-) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 767 a.a.        Molecular weight: 89005.49 Da        Isoelectric Point: 8.5618

>NTDB_id=919957 VO177_RS08920 WP_021495364.1 1775120..1777423(+) (comP) [Bacillus velezensis strain TZS01]
MKKLIKPFTISIIILSVIYVCYVAFININGIIVGTKIVENKHKVLEVAEMSKTSYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTLYAFISVFYHLYKFKYSEHAYILKILILTNTLSFLPFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQF
VANKIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIMIFVIFYFKEVMDYKFRLKRFSEKFN
YQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKKDNEPDWEMYSKEFKKVTSEIGKIIE
LNRGFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVG
CNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=919957 VO177_RS08920 WP_021495364.1 1775120..1777423(+) (comP) [Bacillus velezensis strain TZS01]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATAAATGGAATTATTGTAGGCACGAAAATTGTAGAAAATAAGCATAAAGTACTCGAAGTTGCTGAAATGTCAAAAACCT
CGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTATCACGTTAAAAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTACTTTTTATTTGTCCTGCCCCTTGTATTTTATTTTTTGAGTTTAATATGCATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGTTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTCTCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGATTTTAATTTTAACAAACACGCTCTCTTTTTTGCCCTTTTTGCTTTTTTATGTAATCCCAATTATTT
TGACAGGAAGTTATATATTAGATGCGTTGGCAGCGGCATCCCTGCTCGTGCTTATCCCATTGGGGTTGGTATACCAGTTC
GTAGCTAACAAAATTTTTGATATTGAATTCATTTTAGGCAGGATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCT
TTTTATTGTTGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTA
TTATGATATTTGTCATTTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAAT
TATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAA
GACGATTCTGGATGTTCTGCTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATCATGATA
AAAAGGACAATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATCATTGAG
CTAAACCGCGGTTTTTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCACTATTAATAC
ACCGAGACTGACACGAGATGAGATTTCATGGCTGAAGACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATGTGATAC
AGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAACGGTCGGATTTGGCCCGTGATCTGCATGATTCAGTGTTGCAGGACTTGATTTCTTTGAAGCG
CCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGT
CTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATT
CACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGC
TGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(567-636)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

73.117

100

0.734