Detailed information NTG0918971

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: VNN28_RS01505
• Genome accession: NZ_CP141725
• Coordinates: 300644..302854 (-)
• Length: 736 a.a.
• NCBI ID: WP_338997738.1
• Uniprot ID: -
• Organism: Lactococcus formosensis strain M03102409 EE5d7
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 295644..307854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN28_RS01475 (VNN28_01475)	atpA	295898..297406 (-)	1509	WP_004259170.1	F0F1 ATP synthase subunit alpha	-
VNN28_RS01480 (VNN28_01480)	-	297472..297999 (-)	528	WP_017368855.1	F0F1 ATP synthase subunit delta	-
VNN28_RS01485 (VNN28_01485)	atpF	298014..298520 (-)	507	WP_017368854.1	F0F1 ATP synthase subunit B	-
VNN28_RS01490 (VNN28_01490)	atpB	298534..299247 (-)	714	WP_338997737.1	F0F1 ATP synthase subunit A	-
VNN28_RS01495 (VNN28_01495)	-	299302..299517 (-)	216	WP_003135074.1	F0F1 ATP synthase subunit C	-
VNN28_RS01500 (VNN28_01500)	-	299713..300489 (-)	777	WP_185767510.1	alpha/beta hydrolase family protein	-
VNN28_RS01505 (VNN28_01505)	comEC	300644..302854 (-)	2211	WP_338997738.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
VNN28_RS01510 (VNN28_01510)	comEA/celA/cilE	302874..303515 (-)	642	WP_165711419.1	helix-hairpin-helix domain-containing protein	Machinery gene
VNN28_RS01515 (VNN28_01515)	-	303573..304748 (-)	1176	WP_017368849.1	SLC13 family permease	-
VNN28_RS01520 (VNN28_01520)	-	304913..306469 (-)	1557	WP_017368848.1	ABC-F family ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 84594.56 Da
• Isoelectric Point: 9.8330

>NTDB_id=918971 VNN28_RS01505 WP_338997738.1 300644..302854(-) (comEC) [Lactococcus formosensis strain M03102409 EE5d7]
MKQKFSLIYLVYLLVLVYFLIFSFSWPIIVFSLFSIIVALYRQYYGLLALLLCFSLFLHMVKKEDELQENKQPAKISKIT
PYMDTLQVNGSRLSFRGEVDGRDYQAFYTLSSEKEKEYFKNLAVKGTLYLEGTLEIPEGQRNFSGFDYRKYLRTQGIYRL
LEIEKIHGFEQTYEFDLRLIRRRAILWTQEHFPAPMSSYMTGLLFGCLDKDFEEMEELYTSLGIIHLFALSGMQVNFFIE
LLRNVLLRLGLSRKLVFFIQIPFSIFYAFLTGLSLSILRALLQKNIPFKNPSDRFSITFLLLIVFSPYFLLTTGGQLTML
YSFLITFISRKFKEVKGLKKSLLDSTVLAVGVLPLLIFHFHSFQPLSIILTLLFSMIFDFLLLPGLLFVFLLSLLGTNLT
LLNPFFVVLESVVKLVGNLFDKPIVFGKPDVIFLLLLFILSGLILDFYKKRNWNLVIILVLFCIFFLVKNPKHPSITMVD
VGQGDSILLQDSWNSKNILIDTGGRLKIRTDEHWREGSYKSNAERTLLPYLRARGVSKIDALIVTHPDEDHIGDLKSVAQ
KVPIKNIYVSASALEKQIFVKKLSSLKSQIHIVQEGDKIPIFNSYLRFLTTGGEGKSDNDNSLVTFGEFYGKKFLFTGDL
EEDGEAKLQKGYPHLEVDILKVGHHGSKTSTKEGFLEAIKPKIALISAGKNNRYKHPSQETLHQLTARGIKIYRTDQQGA
IRLLYKKGSWHIQTVK

Nucleotide

• Length: 2211 bp

>NTDB_id=918971 VNN28_RS01505 WP_338997738.1 300644..302854(-) (comEC) [Lactococcus formosensis strain M03102409 EE5d7]
ATGAAACAAAAATTTTCGCTTATCTATTTAGTTTATCTCTTGGTTTTGGTTTATTTTCTTATTTTTAGTTTTTCATGGCC
TATCATTGTTTTTAGCCTTTTCAGTATTATTGTTGCTTTATATCGTCAATATTATGGTTTGTTAGCTCTTTTACTATGCT
TTAGCTTGTTCTTACACATGGTTAAAAAAGAAGATGAATTGCAAGAAAATAAACAACCAGCAAAGATTTCTAAAATCACA
CCCTACATGGATACTCTTCAAGTGAATGGAAGTAGGCTCAGTTTTAGAGGTGAAGTAGATGGAAGAGATTATCAAGCTTT
TTACACGTTGTCTTCTGAAAAAGAGAAAGAATACTTTAAAAATCTTGCCGTAAAGGGGACATTATATCTTGAAGGTACTT
TGGAGATTCCAGAGGGACAGAGAAACTTTTCTGGCTTTGATTATAGAAAGTATTTAAGAACTCAAGGTATTTATCGCCTT
CTCGAAATAGAAAAAATTCATGGCTTTGAACAAACATATGAATTTGATTTACGTCTTATACGTAGAAGAGCTATCCTTTG
GACACAGGAACATTTTCCAGCACCGATGTCCTCCTATATGACAGGACTTCTGTTTGGTTGTCTAGATAAAGACTTTGAAG
AAATGGAGGAGCTCTACACTAGTCTCGGTATTATCCATTTATTTGCTTTGTCAGGTATGCAAGTGAATTTTTTTATTGAA
CTCCTTCGAAATGTTTTACTAAGACTAGGCTTATCACGAAAGTTAGTCTTTTTTATCCAGATTCCCTTTTCGATATTTTA
TGCATTTCTTACAGGCTTATCTCTTTCAATCTTACGTGCGCTCCTACAAAAAAATATCCCTTTTAAAAATCCAAGCGATA
GATTTTCTATCACTTTTCTCCTTTTAATAGTGTTCAGTCCATATTTTCTACTGACTACAGGGGGACAATTGACGATGCTC
TATTCTTTCTTAATCACGTTCATATCGCGAAAATTCAAAGAAGTGAAAGGATTAAAAAAGTCTTTACTTGATTCTACTGT
TTTAGCTGTAGGAGTCCTTCCGCTTTTGATTTTTCATTTCCATAGTTTTCAGCCATTATCGATCATATTGACTTTACTAT
TCAGTATGATCTTTGATTTTTTACTCTTACCTGGTTTGCTTTTTGTTTTTCTCCTTTCTTTACTTGGTACTAATCTGACA
TTACTTAATCCTTTTTTTGTTGTTTTAGAATCAGTAGTAAAGCTGGTTGGGAATTTATTCGACAAACCAATTGTGTTTGG
AAAACCAGATGTTATATTTTTACTTTTACTTTTTATTCTGAGTGGACTTATACTGGATTTTTATAAAAAAAGAAATTGGA
ATTTAGTCATAATACTTGTTCTTTTCTGTATTTTTTTTCTGGTTAAGAATCCTAAACACCCAAGTATTACAATGGTGGAT
GTGGGACAAGGAGACAGTATTCTCTTGCAGGACAGCTGGAACAGTAAAAATATCCTAATAGATACTGGCGGTAGATTAAA
GATAAGAACTGATGAGCACTGGAGGGAAGGAAGCTATAAAAGTAATGCGGAGCGTACACTTCTCCCTTATCTGAGAGCGC
GTGGAGTGAGTAAGATAGATGCCCTGATAGTGACACATCCAGATGAGGATCATATTGGAGACTTGAAGAGTGTAGCTCAG
AAAGTACCAATAAAAAATATTTATGTCTCAGCTAGTGCATTAGAGAAGCAAATTTTTGTGAAAAAACTAAGCAGCTTAAA
AAGTCAGATTCACATTGTGCAAGAGGGAGACAAGATTCCCATATTTAACAGCTATCTCCGATTTTTAACGACAGGAGGTG
AAGGAAAAAGCGATAATGATAATTCTTTAGTGACATTTGGTGAATTTTATGGGAAGAAATTTCTTTTTACAGGTGACTTA
GAAGAAGACGGAGAGGCTAAACTCCAGAAAGGATATCCACATTTAGAGGTTGATATCCTAAAAGTTGGACATCACGGCAG
TAAGACTTCTACAAAGGAAGGTTTTTTAGAAGCGATTAAGCCTAAGATTGCTCTTATTTCTGCTGGAAAAAATAATCGAT
ATAAACATCCGAGTCAAGAGACGCTTCACCAATTAACTGCACGAGGAATAAAAATTTATCGGACAGACCAGCAAGGAGCG
ATCCGTCTCCTATATAAAAAAGGCAGCTGGCACATTCAAACAGTAAAGTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (481-689)

• Domain of unknown function (DUF4131) (DUF4131) (21-166)

• Competence protein (Competence) (203-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	52.115	99.592	0.519
comEC/celB	Streptococcus mitis SK321	45.845	100	0.465
comEC/celB	Streptococcus mitis NCTC 12261	44.43	100	0.45
comEC/celB	Streptococcus pneumoniae TIGR4	43.952	100	0.444
comEC/celB	Streptococcus pneumoniae Rx1	43.817	100	0.443
comEC/celB	Streptococcus pneumoniae D39	43.817	100	0.443
comEC/celB	Streptococcus pneumoniae R6	43.817	100	0.443