Detailed information NTG0918737

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: VNN36_RS00430
• Genome accession: NZ_CP141717
• Coordinates: 92063..94210 (+)
• Length: 715 a.a.
• NCBI ID: WP_339013321.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain R22-8
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 87063..99210

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN36_RS00405 (VNN36_00405)	liaF	87642..88259 (-)	618	WP_339013307.1	cell wall-active antibiotics response protein LiaF	-
VNN36_RS00410 (VNN36_00410)	-	88418..88711 (+)	294	WP_017370748.1	hypothetical protein	-
VNN36_RS00415 (VNN36_00415)	-	89556..90353 (-)	798	WP_339013312.1	abortive infection family protein	-
VNN36_RS00420 (VNN36_00420)	-	91233..91409 (+)	177	WP_339013315.1	garvicin Q family class II bacteriocin	-
VNN36_RS00425 (VNN36_00425)	-	91476..91775 (+)	300	WP_339013318.1	bacteriocin immunity protein	-
VNN36_RS00430 (VNN36_00430)	comA	92063..94210 (+)	2148	WP_339013321.1	peptide cleavage/export ABC transporter	Regulator
VNN36_RS00435 (VNN36_00435)	-	94220..95158 (+)	939	WP_339013324.1	bacteriocin secretion accessory protein	-
VNN36_RS00440 (VNN36_00440)	-	95244..95642 (+)	399	WP_339013326.1	HlyD family efflux transporter periplasmic adaptor subunit	-
VNN36_RS00445 (VNN36_00445)	-	95766..96380 (-)	615	WP_339013329.1	hypothetical protein	-
VNN36_RS00450 (VNN36_00450)	-	96634..97791 (+)	1158	Protein_89	IS3 family transposase	-
VNN36_RS00455 (VNN36_00455)	-	97777..97986 (-)	210	WP_339013331.1	hypothetical protein	-
VNN36_RS00460 (VNN36_00460)	-	98123..98446 (+)	324	WP_339013334.1	helix-turn-helix transcriptional regulator	-
VNN36_RS00465 (VNN36_00465)	-	98576..99025 (-)	450	WP_339013337.1	hypothetical protein	-

Sequence

Protein

• Length: 715 a.a.
• Molecular weight: 80651.98 Da
• Isoelectric Point: 8.2715

>NTDB_id=918737 VNN36_RS00430 WP_339013321.1 92063..94210(+) (comA) [Lactococcus garvieae strain R22-8]
MRFKKKYYTSQVDERDCGCAALSMVLKTYGTEQSLASIRLLAGTTIEGTSALGIKKAAEHLKFSVQAFRADPTLFDTKKL
PYPFIVHVVKEKKYPHYYVVKYSNKKNIIIADPDPTVKIRKMTWDQFYSEWTGVTLFIAPQPSYKPVKEKSESLFSFIPI
LAKQKLLVFQIIIASLLVTLINIIGSYYLQNIIDEYVPNALMKTLSIVSLGLMATYLIQQFLNFAQTFLLTILGQRLAID
VILSYIRHIFQLPMSFFSTRRTGEITSRFSDANSIIDALASSILSLFLDVTIVLLTGLVLGLQNTQLFLLALFTLPLYAL
IIFIFVPVFEKQNNEVMQANSLLNSSIIEDINGIETIKSLGSEEVRYQKTDREFADYMKKSFSRQKSEAFQTALKSGLQL
VLNVLILWYGATLVMSQKITLGQLITFNALLSYFMNPLSNIINLQTKLQSAKVANHRLNEVYLIDSEFDTNTDEVILSNF
EMQLIGISYHYGFGRDILSNISLNIKENEKLTIVGMSGSGKSTLVKLLVNFFEPTQGTIILGGIDIKQMDKHQLRSIVSY
LPQQPYIFTGTVLENLILGASEDISQEEIFQAVEAAEIRSDIEQLQLGYQTELSSDATTLSGGQKQRIALARALLSPAKI
LIFDEATSNLDMITEKKILKNLFKLDKTIIFIAHRLSIAEKSDRIVVIDQGKIMEEGSHLELLSKNGFYAQLYNQ

Nucleotide

• Length: 2148 bp

>NTDB_id=918737 VNN36_RS00430 WP_339013321.1 92063..94210(+) (comA) [Lactococcus garvieae strain R22-8]
ATGCGTTTTAAAAAGAAATATTATACGTCACAAGTGGATGAAAGAGATTGTGGGTGTGCTGCCCTTTCTATGGTTTTAAA
AACTTATGGTACAGAACAATCCCTAGCTTCAATACGTTTACTTGCTGGTACAACAATAGAAGGCACCTCTGCTCTAGGTA
TAAAAAAAGCCGCAGAACATTTAAAGTTCAGCGTTCAAGCCTTTCGTGCAGATCCAACTCTATTTGATACAAAGAAACTT
CCTTATCCATTTATTGTTCATGTGGTTAAAGAAAAGAAATACCCTCACTATTATGTGGTTAAATACTCCAATAAAAAAAA
TATCATTATTGCAGATCCAGATCCCACGGTTAAAATTCGGAAAATGACTTGGGACCAGTTTTATTCTGAATGGACAGGTG
TAACTTTATTTATTGCTCCTCAGCCTTCTTATAAACCAGTGAAAGAAAAATCCGAGTCTTTGTTTTCTTTTATACCCATA
CTCGCAAAGCAAAAGTTGCTTGTTTTTCAGATTATTATTGCTTCTCTTTTAGTCACTTTAATTAATATTATCGGCTCTTA
TTATCTTCAGAATATTATTGACGAATATGTGCCTAATGCTTTAATGAAAACTTTAAGCATTGTGTCTCTTGGATTAATGG
CAACCTATCTCATCCAGCAATTCCTTAATTTTGCTCAAACTTTCTTACTTACAATACTCGGACAACGTTTAGCCATTGAT
GTTATCCTTTCCTATATCCGTCATATTTTTCAACTTCCTATGTCCTTTTTTTCTACACGAAGAACGGGAGAAATTACCAG
TCGTTTCTCTGACGCCAATTCAATTATTGATGCCCTGGCCTCATCCATCTTATCTCTCTTCTTAGATGTGACCATTGTAC
TTTTGACAGGCCTTGTCTTAGGACTTCAAAATACGCAATTGTTCCTGCTCGCTTTATTCACCCTCCCACTTTACGCTCTT
ATCATTTTTATTTTTGTTCCCGTATTTGAAAAACAAAATAATGAAGTCATGCAAGCAAATTCTCTTTTAAATTCGTCAAT
TATTGAAGATATCAATGGAATTGAAACTATTAAATCTCTTGGAAGTGAGGAGGTTCGCTATCAAAAAACAGACCGTGAAT
TTGCGGACTACATGAAAAAATCATTCTCGCGTCAAAAATCAGAAGCTTTTCAAACTGCCTTGAAATCAGGATTACAACTT
GTTTTAAATGTACTTATCTTGTGGTATGGAGCTACCCTCGTGATGAGCCAAAAAATCACCTTGGGTCAATTGATTACTTT
CAATGCCTTACTTTCATACTTTATGAATCCTCTCTCTAATATCATCAACTTACAAACTAAACTTCAATCCGCTAAAGTAG
CTAACCATCGTTTAAATGAAGTTTACTTGATAGACAGTGAATTTGATACAAATACAGATGAAGTTATTCTTTCAAATTTT
GAGATGCAGTTGATAGGTATATCTTACCACTATGGTTTTGGTAGAGACATTCTCTCTAATATTTCACTTAATATAAAAGA
AAATGAAAAATTAACAATTGTCGGAATGAGTGGCTCAGGTAAAAGTACCCTAGTCAAATTGTTGGTTAATTTTTTCGAAC
CTACACAAGGGACTATCATTCTTGGAGGGATAGATATAAAACAAATGGATAAGCACCAATTGAGAAGTATTGTCAGCTAT
CTTCCCCAACAACCGTATATCTTTACAGGAACAGTACTAGAGAACTTAATCTTAGGAGCAAGTGAGGATATTTCTCAGGA
AGAAATTTTCCAAGCTGTTGAAGCTGCAGAAATTCGTTCCGACATTGAACAACTTCAATTGGGCTATCAAACAGAACTAT
CTAGTGATGCTACAACTCTCTCTGGAGGTCAAAAACAAAGAATCGCATTAGCTCGTGCCTTACTTTCTCCCGCGAAGATT
CTTATTTTTGATGAAGCAACAAGTAATCTGGATATGATTACAGAGAAAAAAATTCTGAAAAATCTATTTAAGTTAGATAA
AACCATTATTTTTATTGCCCATCGCCTGTCTATCGCGGAAAAGAGCGATAGGATTGTTGTTATTGATCAGGGAAAAATTA
TGGAAGAAGGTAGTCATTTAGAACTGCTTTCTAAAAATGGTTTTTATGCACAGCTTTATAATCAATAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (498-648)

• Peptidase C39 family (Peptidase_C39) (6-142)

• ABC transporter transmembrane region (ABC_membrane) (170-438)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus gordonii str. Challis substr. CH1	60.754	100	0.608
comA	Streptococcus mitis SK321	59.777	100	0.599
comA	Streptococcus mitis NCTC 12261	59.637	100	0.597
comA	Streptococcus pneumoniae Rx1	59.497	100	0.596
comA	Streptococcus pneumoniae D39	59.497	100	0.596
comA	Streptococcus pneumoniae R6	59.497	100	0.596
comA	Streptococcus pneumoniae TIGR4	59.218	100	0.593
comA/nlmT	Streptococcus mutans UA159	58.577	100	0.587