Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   U8771_RS04575 Genome accession   NZ_CP141640
Coordinates   962657..963961 (-) Length   434 a.a.
NCBI ID   WP_015509239.1    Uniprot ID   A0A200IEL7
Organism   Enterococcus casseliflavus strain Dec0527     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 957657..968961
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U8771_RS04545 (U8771_04545) - 957659..958693 (+) 1035 WP_262119073.1 hypothetical protein -
  U8771_RS04550 (U8771_04550) - 958754..959098 (-) 345 WP_005234590.1 peptidase -
  U8771_RS04555 (U8771_04555) pepA 959391..960467 (+) 1077 WP_324641588.1 glutamyl aminopeptidase -
  U8771_RS04560 (U8771_04560) - 960601..960921 (+) 321 WP_324640926.1 thioredoxin family protein -
  U8771_RS04565 (U8771_04565) - 960934..961395 (+) 462 WP_005225429.1 universal stress protein -
  U8771_RS04570 (U8771_04570) ytpR 961974..962588 (+) 615 WP_142964304.1 YtpR family tRNA-binding protein -
  U8771_RS04575 (U8771_04575) htrA 962657..963961 (-) 1305 WP_015509239.1 S1C family serine protease Regulator
  U8771_RS04580 (U8771_04580) rlmH 964335..964814 (+) 480 WP_142972842.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  U8771_RS04585 (U8771_04585) truA 964881..965618 (+) 738 WP_005225435.1 tRNA pseudouridine(38-40) synthase TruA -
  U8771_RS04590 (U8771_04590) map 965661..966446 (+) 786 WP_142962483.1 type I methionyl aminopeptidase -
  U8771_RS04595 (U8771_04595) - 966507..966605 (+) 99 WP_123906405.1 type I toxin-antitoxin system Fst family toxin -
  U8771_RS04600 (U8771_04600) - 966952..967119 (+) 168 WP_123906404.1 hypothetical protein -
  U8771_RS04605 (U8771_04605) - 967406..967669 (+) 264 WP_074932272.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein -
  U8771_RS04610 (U8771_04610) - 967663..968013 (+) 351 WP_096741485.1 type II toxin-antitoxin system PemK/MazF family toxin -
  U8771_RS04615 (U8771_04615) - 968329..968736 (-) 408 WP_317720856.1 AsnC family transcriptional regulator -

Sequence


Protein


Download         Length: 434 a.a.        Molecular weight: 44863.37 Da        Isoelectric Point: 4.0412

>NTDB_id=917794 U8771_RS04575 WP_015509239.1 962657..963961(-) (htrA) [Enterococcus casseliflavus strain Dec0527]
MARKYVTPGKKTSPGLLKRLGIGILGGMVGGLLTFGGLYLAMGSSLTSTPETTTNSGVQDSNGQTQVSNVKLDVTSDVTE
AVEKVQDSVVSIINLQQSQSNDWNSLFGQQGGQSEGDSQSDDDSALEASSEGSGVIYKIDGDDAYVVTNNHVVEGQDGLE
VVLADGTKVKAELVGTDAYTDLAVLKISSEHVKTAATFGDSSALKVGEPAIAIGSPLGSDYANSVTQGIVSSLNRQVTSQ
NESGGTISINAIQTDAAINPGNSGGPLINVDGQVIGINSSKIASTSGSASGVSVEGMGFAIPSNDVVEIINQLEADGKVV
RPALGIQTIDLGSITSQQQEQILKVPSSVTSGVVIYSVNNATPAEQAGLQQYDVITKIDDTEVSTTTDLQSALYKHKVGD
TITVTFYRGDEEKTAEVKLSVDTSINEQSTDSSN

Nucleotide


Download         Length: 1305 bp        

>NTDB_id=917794 U8771_RS04575 WP_015509239.1 962657..963961(-) (htrA) [Enterococcus casseliflavus strain Dec0527]
ATGGCAAGAAAATATGTCACACCAGGCAAGAAAACTTCTCCTGGTTTATTAAAACGATTAGGTATTGGGATTTTAGGCGG
TATGGTCGGCGGTTTATTGACCTTCGGCGGTCTGTATCTGGCAATGGGTTCCTCTTTGACTTCAACACCAGAAACCACGA
CCAACAGCGGGGTCCAAGATTCTAACGGACAAACCCAAGTATCCAATGTAAAACTTGATGTGACTAGCGATGTCACTGAG
GCAGTTGAAAAAGTACAAGATTCTGTCGTTTCCATCATTAATCTACAACAAAGTCAAAGCAACGATTGGAACAGCCTCTT
TGGTCAGCAAGGCGGACAAAGTGAAGGCGATAGCCAAAGCGATGACGACAGTGCTTTAGAAGCTTCTTCTGAAGGGAGTG
GGGTCATCTACAAAATCGATGGCGACGATGCCTATGTTGTAACCAACAACCACGTCGTAGAAGGTCAAGACGGTTTAGAA
GTTGTTTTAGCAGACGGTACGAAAGTCAAAGCTGAATTGGTCGGTACTGACGCTTACACAGACTTAGCTGTATTGAAAAT
CTCTTCAGAGCATGTGAAGACTGCCGCAACATTTGGTGATTCAAGTGCCTTGAAAGTCGGCGAACCAGCCATCGCGATCG
GTTCTCCTCTAGGCTCTGACTACGCAAACTCTGTGACACAAGGGATCGTTTCTTCCTTGAATCGTCAAGTAACAAGCCAA
AACGAATCTGGTGGTACGATCAGCATCAATGCGATCCAAACGGATGCTGCGATTAACCCAGGGAACTCTGGTGGTCCACT
GATCAACGTTGATGGCCAAGTGATTGGGATCAACTCAAGTAAAATCGCCAGCACCTCGGGCTCTGCTTCAGGTGTTAGTG
TCGAAGGGATGGGCTTTGCGATCCCAAGTAACGATGTCGTTGAAATCATCAATCAACTAGAAGCAGACGGCAAAGTGGTT
CGCCCTGCACTAGGGATCCAAACGATCGATTTAGGTTCCATCACATCACAACAACAAGAACAAATCTTGAAAGTTCCTTC
ATCCGTAACTTCTGGCGTTGTGATTTACTCAGTCAACAATGCAACACCAGCAGAACAAGCAGGATTGCAACAATATGACG
TTATCACGAAGATCGATGATACAGAAGTCAGCACAACAACGGATCTGCAATCTGCGTTGTACAAACACAAAGTCGGTGAC
ACGATCACTGTAACCTTCTATCGTGGCGATGAAGAAAAAACGGCAGAAGTAAAACTTTCCGTTGATACGTCGATCAACGA
ACAATCAACAGACAGCAGCAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A200IEL7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

56.171

91.475

0.514

  htrA Streptococcus gordonii str. Challis substr. CH1

51.074

96.544

0.493

  htrA Streptococcus mitis NCTC 12261

55.432

82.719

0.459

  htrA Streptococcus pneumoniae TIGR4

57.018

78.802

0.449

  htrA Streptococcus pneumoniae Rx1

57.018

78.802

0.449

  htrA Streptococcus pneumoniae D39

57.018

78.802

0.449

  htrA Streptococcus pneumoniae R6

57.018

78.802

0.449