Detailed information NTG0917692

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: U9R80_RS26465
• Genome accession: NZ_CP141608
• Coordinates: 5783299..5784789 (+)
• Length: 496 a.a.
• NCBI ID: WP_301838808.1
• Uniprot ID: -
• Organism: Pseudomonas sp. JQ170C
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 5778299..5789789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U9R80_RS26435 (U9R80_26435)	-	5778753..5779448 (+)	696	WP_028942415.1	HAD-IA family hydrolase	-
U9R80_RS26440 (U9R80_26440)	sutA	5779577..5779900 (-)	324	WP_301838803.1	transcriptional regulator SutA	-
U9R80_RS26445 (U9R80_26445)	-	5780376..5781707 (-)	1332	WP_301838804.1	ammonium transporter	-
U9R80_RS26450 (U9R80_26450)	glnK	5781750..5782088 (-)	339	WP_002555808.1	P-II family nitrogen regulator	-
U9R80_RS26455 (U9R80_26455)	-	5782496..5782759 (+)	264	WP_038615819.1	accessory factor UbiK family protein	-
U9R80_RS26460 (U9R80_26460)	-	5782921..5783055 (-)	135	WP_301838807.1	hypothetical protein	-
U9R80_RS26465 (U9R80_26465)	comM	5783299..5784789 (+)	1491	WP_301838808.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
U9R80_RS26470 (U9R80_26470)	-	5784895..5785791 (+)	897	WP_301838809.1	hypothetical protein	-
U9R80_RS26475 (U9R80_26475)	-	5786014..5786766 (+)	753	WP_301838811.1	winged helix-turn-helix domain-containing protein	-
U9R80_RS26480 (U9R80_26480)	-	5786763..5787239 (+)	477	WP_301838813.1	hypothetical protein	-
U9R80_RS26485 (U9R80_26485)	-	5787333..5788034 (+)	702	WP_301838815.1	DUF3313 domain-containing protein	-
U9R80_RS26490 (U9R80_26490)	-	5788071..5788571 (+)	501	WP_301838817.1	outer membrane beta-barrel protein	-

Sequence

Protein

• Length: 496 a.a.
• Molecular weight: 52777.47 Da
• Isoelectric Point: 7.2281

>NTDB_id=917692 U9R80_RS26465 WP_301838808.1 5783299..5784789(+) (comM) [Pseudomonas sp. JQ170C]
MSLALVHSRAQVGVSAPAVSVEAHLANGLPALTLVGLPEATVKESKDRVRSAILNSGLEFPARRITLNLAPADLPKDGGR
FDLAIALGILAANGQFPSQALDEVECLGELALSGAVRPVQGVLPAALAARAAGRALVIPRENAEEACLANGLVVYAVEHL
LELIAHFNGQAPLAPYAANGLLLQIQPYPDLNEVQGQQAAKRALLVAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLDE
REALEVAAIQSVASHVPLSSWPQRPFRHPHHSSSGPALVGGGSRPQPGEITLAHHGVLFLDELPEFERRVLEVLREPLES
GEIVIARAKDKIRFPARFQLVAAMNPCPCGYLGDPNGRCRCGSDQIQRYRNKLSGPLLDRIDLHLTVAREATALSATCNN
GQSSASIAALVAEARDTQHQRQGCANAFLDLPGLRQHCGLSTADQHWLESACERLTLSLRAAHRLLKVARTLADLDQAPH
IVREHLAEALQYRPGN

Nucleotide

• Length: 1491 bp

>NTDB_id=917692 U9R80_RS26465 WP_301838808.1 5783299..5784789(+) (comM) [Pseudomonas sp. JQ170C]
ATGTCCCTCGCCCTTGTCCACAGCCGCGCCCAGGTGGGCGTATCGGCCCCGGCGGTCAGTGTCGAAGCTCACCTGGCCAA
CGGCCTGCCCGCCCTGACCCTGGTTGGTTTACCCGAAGCCACCGTCAAGGAAAGCAAGGACCGCGTTCGCAGCGCGATCC
TCAATTCGGGCCTGGAGTTTCCGGCCCGGCGCATCACCCTCAACCTTGCCCCGGCCGATCTGCCCAAGGACGGCGGGCGC
TTCGACCTGGCCATTGCCCTGGGAATTCTGGCCGCCAACGGACAGTTCCCGAGCCAGGCACTGGACGAAGTCGAATGCCT
GGGCGAGCTGGCGTTGTCTGGTGCCGTGCGGCCGGTACAAGGCGTTTTGCCGGCAGCACTGGCCGCACGGGCAGCCGGGC
GCGCACTGGTGATCCCGCGGGAAAACGCCGAAGAGGCCTGCCTGGCCAATGGCCTGGTGGTGTACGCCGTCGAGCATCTG
CTGGAGCTGATTGCCCACTTCAACGGCCAGGCACCGCTGGCCCCCTATGCCGCCAACGGCTTGCTGCTACAGATACAACC
CTACCCCGACCTGAATGAAGTGCAGGGCCAGCAGGCCGCCAAGCGTGCGCTGCTGGTGGCCGCTGCCGGCGCGCACAATC
TGCTGTTCAGCGGCCCACCCGGCACCGGCAAGACGCTGCTCGCCAGCCGCCTGCCCGGCCTGTTGCCACCGCTGGATGAG
CGCGAGGCGCTGGAAGTGGCGGCTATCCAGTCGGTGGCCAGCCACGTCCCCCTGAGCAGTTGGCCGCAACGCCCCTTTCG
TCACCCTCACCATTCGTCTTCTGGCCCGGCCCTGGTCGGCGGTGGCAGCCGCCCGCAACCGGGCGAAATCACCCTCGCCC
ACCATGGCGTGCTGTTCCTCGATGAGCTTCCGGAGTTCGAGCGCCGGGTACTGGAGGTGCTGCGCGAGCCGCTGGAATCG
GGCGAGATCGTTATCGCCCGGGCCAAGGACAAGATCCGCTTTCCGGCCCGCTTCCAGCTGGTCGCCGCCATGAATCCCTG
CCCCTGTGGATACCTCGGCGACCCCAACGGCCGCTGTCGCTGCGGCAGCGACCAGATCCAGCGCTACCGCAACAAGCTCT
CGGGCCCCTTGCTCGACCGCATCGACCTGCACCTGACCGTCGCCCGCGAAGCCACCGCCTTGTCGGCCACCTGCAACAAT
GGCCAAAGTAGCGCCAGCATCGCGGCACTGGTTGCCGAGGCACGAGACACCCAGCACCAGCGCCAGGGATGTGCCAATGC
CTTTCTCGACCTGCCTGGCCTGCGCCAGCACTGCGGGTTATCCACAGCCGACCAGCACTGGCTCGAAAGCGCCTGCGAGC
GCCTGACCCTGTCGCTGCGCGCCGCCCACCGGCTGCTCAAGGTCGCCCGCACGCTGGCGGATCTTGACCAGGCCCCTCAC
ATCGTCCGCGAGCACCTGGCCGAAGCCCTGCAGTATCGACCCGGCAACTAA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-493)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	55.354	99.798	0.552
comM	Vibrio campbellii strain DS40M4	55.354	99.798	0.552
comM	Haemophilus influenzae Rd KW20	54.2	100	0.546
comM	Glaesserella parasuis strain SC1401	52.495	100	0.53
comM	Legionella pneumophila str. Paris	48.617	100	0.496
comM	Legionella pneumophila strain ERS1305867	48.617	100	0.496
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.918	100	0.476