Detailed information NTG0913584

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: U3Q39_RS02935
• Genome accession: NZ_CP140298
• Coordinates: 626498..627562 (+)
• Length: 354 a.a.
• NCBI ID: WP_048328486.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain MJL19
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 621498..632562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U3Q39_RS02920 (U3Q39_002920)	-	621624..622418 (+)	795	WP_170799318.1	thermonuclease family protein	-
U3Q39_RS02925 (U3Q39_002925)	-	622560..623828 (+)	1269	WP_011911783.1	malic enzyme-like NAD(P)-binding protein	-
U3Q39_RS02930 (U3Q39_002930)	-	623895..626318 (-)	2424	WP_170799319.1	penicillin-binding protein 1A	-
U3Q39_RS02935 (U3Q39_002935)	comM	626498..627562 (+)	1065	WP_048328486.1	pilus assembly protein PilM	Machinery gene
U3Q39_RS02940 (U3Q39_002940)	pilN	627562..628134 (+)	573	WP_053527824.1	type 4a pilus biogenesis protein PilN	-
U3Q39_RS02945 (U3Q39_002945)	pilO	628131..628754 (+)	624	WP_053527825.1	type 4a pilus biogenesis protein PilO	-
U3Q39_RS02950 (U3Q39_002950)	pilP	628751..629278 (+)	528	WP_053527826.1	type 4a pilus biogenesis lipoprotein PilP	-
U3Q39_RS02955 (U3Q39_002955)	pilQ	629332..631410 (+)	2079	WP_053527827.1	type IV pilus secretin PilQ	Machinery gene
U3Q39_RS02960 (U3Q39_002960)	aroK	631417..631962 (+)	546	WP_020307762.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37760.28 Da
• Isoelectric Point: 4.6880

>NTDB_id=913584 U3Q39_RS02935 WP_048328486.1 626498..627562(+) (comM) [Stutzerimonas stutzeri strain MJL19]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKMIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLASQLGTGHGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHMIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=913584 U3Q39_RS02935 WP_048328486.1 626498..627562(+) (comM) [Stutzerimonas stutzeri strain MJL19]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTCCTCGAATT
AAGTCGATCGGGTAATCGGTACCGCGTCGAGGCTTATGCCGTCGAGCCGCTACCGCCGAATGCCGTCGTCGAAAAGAACA
TCGCCGAACTTGAGGGTGTCGGTCAGGCCCTGCAGCGGGTCGTTGCCAAGGCCAAGACCGGCTGCAAGTCCGCTGTTGTC
GCTGTCTCCGGGTCTGCCGTCATCACAAAGATGATTGAGATGGATGCCGGGCTTTCTGATGAAGAGCTCGAGAACCAGCT
CAAGATCGAGGCGGATCAGTACATCCCCTACCCACTGGAGGAAGTCGCGATCGACTTCGAGGTGCAAGGTCCTGCGCCTC
GCGCGCCTGGCAGGGTAGAAGTTCTCCTCGCCGCTTGCCGTAAAGAGAATGTCGAGATCCGTGAAGCCGCGCTGGCCTTG
GCCGGACTTACCGCCAAAGTGGTGGATGTCGAGGCCTATGCGCTTGAGCGCTCCTATGGGTTGCTCGCTTCACAGTTGGG
TACAGGGCACGGCGAGCTGACCGTTGCCGTCGTCGACATCGGCGCGACCATGACAACCCTGAGCGTGCTGCATAACGGGC
GCACCATCTACACGCGCGAGCAGCTGTTCGGTGGTCGCCAACTGACCGAAGAGATCCAGCGCCGCTACGGTCTGTCTCAG
GAAGAAGCCGGCCTTGCCAAGAAGCAAGGCGGTCTCCCAGATGACTACGACAGTGAAGTCCTGCTTCCGTTCAAGGAGGC
GGTGGTGCAGCAGGTATCCCGCTCGTTGCAGTTCTTCTTCGCTGCAGGGCAGTTCCACGACGTCGACTGCATCCTGCTCG
CGGGCGGGACGGCCTCCATTCCGGGTCTCGATCACATGATCCAGCAAAAGATCGGAACGCAAACTCTAGTGGCTAATCCC
TTCGCCGATATGGCTTTGAGCAGCAAGGTGAACGCCGGGGCGCTGGCTAGTGATGCGCCTGCATTAATGATTGCATGCGG
TTTGGCGCTGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463