Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   L6411_RS08405 Genome accession   NZ_AP025333
Coordinates   1750358..1751080 (-) Length   240 a.a.
NCBI ID   WP_024531872.1    Uniprot ID   A0A2Z5TQ77
Organism   Streptococcus ruminantium strain GUT-189     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context


Location: 1745358..1756080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6411_RS08380 (GUT189_16190) sufU 1745401..1745841 (-) 441 WP_120172171.1 Fe-S cluster assembly sulfur transfer protein SufU -
  L6411_RS08385 (GUT189_16200) - 1745828..1747054 (-) 1227 WP_237374066.1 cysteine desulfurase -
  L6411_RS08390 (GUT189_16210) sufD 1747056..1748318 (-) 1263 WP_237374067.1 Fe-S cluster assembly protein SufD -
  L6411_RS08395 (GUT189_16220) sufC 1748335..1749108 (-) 774 WP_024531874.1 Fe-S cluster assembly ATPase SufC -
  L6411_RS08400 (GUT189_16230) - 1749201..1750361 (-) 1161 WP_120172178.1 glycosyltransferase family 4 protein -
  L6411_RS08405 (GUT189_16240) mecA 1750358..1751080 (-) 723 WP_024531872.1 adaptor protein MecA Regulator
  L6411_RS08410 (GUT189_16250) - 1751291..1752127 (-) 837 WP_155964977.1 undecaprenyl-diphosphate phosphatase -
  L6411_RS08415 (GUT189_16260) - 1752260..1753822 (+) 1563 WP_156021675.1 ABC transporter substrate-binding protein/permease -
  L6411_RS08420 (GUT189_16270) - 1753815..1754558 (+) 744 WP_155962430.1 amino acid ABC transporter ATP-binding protein -
  L6411_RS08425 (GUT189_16280) - 1754804..1755013 (-) 210 WP_024531868.1 hypothetical protein -
  L6411_RS08430 (GUT189_16290) - 1755099..1755998 (-) 900 WP_024531867.1 SPFH domain-containing protein -

Sequence


Protein


Download         Length: 240 a.a.        Molecular weight: 28012.59 Da        Isoelectric Point: 4.1200

>NTDB_id=91255 L6411_RS08405 WP_024531872.1 1750358..1751080(-) (mecA) [Streptococcus ruminantium strain GUT-189]
MKVKQISDSTLKITIKLDDLEERGMELSDFLIPQEKTEEFFYTVLDELDLPMTFRESGMLSFRVTPKPDRVDIFVTKSDL
DQNLNFDEFTDLSDLGDVASMTPDEFFKSLEQTVREKSAADVAAVHHLEDIEQAEEDEDGEQERYIYYILEFKKIEELFI
FVGTVDYSIEESELYKMDGYYYLTVLVDIENRSKQYPEHLLSRMLEFSNDTKLARPVLQEHGMLLLSHAAIEELRKVTIA

Nucleotide


Download         Length: 723 bp        

>NTDB_id=91255 L6411_RS08405 WP_024531872.1 1750358..1751080(-) (mecA) [Streptococcus ruminantium strain GUT-189]
ATGAAAGTAAAGCAAATTAGTGATTCTACCTTAAAAATCACTATCAAATTGGATGACTTGGAAGAAAGAGGCATGGAACT
TTCTGACTTTCTTATCCCACAGGAGAAGACAGAAGAGTTTTTCTACACAGTTCTGGATGAGCTGGACTTGCCGATGACTT
TCCGCGAAAGTGGTATGCTGAGTTTCCGTGTGACACCAAAGCCTGATAGGGTTGACATTTTTGTGACCAAATCTGATTTG
GATCAAAATTTGAATTTTGATGAATTTACAGATTTGTCTGACCTTGGTGATGTTGCCAGCATGACTCCAGATGAATTTTT
CAAGAGTTTGGAGCAGACGGTTCGTGAGAAGAGTGCCGCAGATGTAGCTGCTGTCCACCATCTAGAAGATATTGAGCAGG
CAGAAGAGGATGAGGACGGAGAGCAAGAACGGTATATCTACTACATTTTAGAGTTCAAAAAGATTGAAGAACTATTTATT
TTTGTTGGTACGGTTGACTATTCGATTGAAGAATCGGAACTTTATAAGATGGATGGTTACTATTATCTGACAGTTCTTGT
TGATATAGAAAACCGTTCCAAGCAATATCCAGAGCACCTTCTTTCACGTATGTTAGAGTTTTCCAACGATACAAAATTAG
CAAGACCTGTCTTGCAAGAACACGGGATGCTCCTCCTCTCCCATGCAGCGATTGAAGAGCTTAGAAAGGTTACAATAGCA
TGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2Z5TQ77

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

55.328

100

0.563

  mecA Streptococcus pneumoniae D39

55.328

100

0.563

  mecA Streptococcus pneumoniae R6

55.328

100

0.563

  mecA Streptococcus pneumoniae TIGR4

55.328

100

0.563

  mecA Streptococcus mutans UA159

50

100

0.508

  mecA Streptococcus thermophilus LMD-9

46.586

100

0.483

  mecA Streptococcus thermophilus LMG 18311

46.185

100

0.479


Multiple sequence alignment