Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | R3F76_RS39775 | Genome accession | NZ_CP139647 |
| Coordinates | 8321663..8321806 (-) | Length | 47 a.a. |
| NCBI ID | WP_158332945.1 | Uniprot ID | - |
| Organism | Bradyrhizobium japonicum strain CNPSo 23 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 8316663..8326806
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R3F76_RS39755 (R3F76_39750) | - | 8317371..8318399 (-) | 1029 | WP_039156289.1 | SAM-dependent methyltransferase | - |
| R3F76_RS39760 (R3F76_39755) | - | 8318783..8319808 (+) | 1026 | WP_039156287.1 | hypothetical protein | - |
| R3F76_RS39765 (R3F76_39760) | - | 8319963..8320991 (+) | 1029 | WP_039156285.1 | peptidoglycan -binding protein | - |
| R3F76_RS39770 (R3F76_39765) | - | 8320991..8321437 (+) | 447 | WP_039156282.1 | GNAT family N-acetyltransferase | - |
| R3F76_RS39775 (R3F76_39770) | comA/nlmT | 8321663..8321806 (-) | 144 | WP_158332945.1 | hypothetical protein | Regulator |
| R3F76_RS39780 (R3F76_39775) | - | 8321934..8322815 (-) | 882 | WP_039156279.1 | hypothetical protein | - |
| R3F76_RS39785 (R3F76_39780) | - | 8322909..8323694 (-) | 786 | WP_148312428.1 | trypsin-like peptidase domain-containing protein | - |
| R3F76_RS39790 (R3F76_39785) | - | 8324030..8325874 (-) | 1845 | WP_038933463.1 | ABC transporter ATP-binding protein/permease | - |
| R3F76_RS39795 (R3F76_39790) | rpmE | 8326075..8326302 (+) | 228 | WP_008137002.1 | 50S ribosomal protein L31 | - |
Sequence
Protein
Download Length: 47 a.a. Molecular weight: 5152.00 Da Isoelectric Point: 7.1631
>NTDB_id=910412 R3F76_RS39775 WP_158332945.1 8321663..8321806(-) (comA/nlmT) [Bradyrhizobium japonicum strain CNPSo 23]
MIAHRPATVLSCDRILVMDQGKIVEQGTHAELVAKNGLYARLQFEGA
MIAHRPATVLSCDRILVMDQGKIVEQGTHAELVAKNGLYARLQFEGA
Nucleotide
Download Length: 144 bp
>NTDB_id=910412 R3F76_RS39775 WP_158332945.1 8321663..8321806(-) (comA/nlmT) [Bradyrhizobium japonicum strain CNPSo 23]
GTGATCGCGCACCGGCCCGCCACCGTGCTGTCCTGCGACCGCATCCTGGTGATGGACCAGGGCAAGATCGTCGAGCAGGG
CACGCACGCCGAGCTCGTCGCCAAGAACGGGCTCTATGCGAGGCTGCAGTTCGAGGGCGCGTGA
GTGATCGCGCACCGGCCCGCCACCGTGCTGTCCTGCGACCGCATCCTGGTGATGGACCAGGGCAAGATCGTCGAGCAGGG
CACGCACGCCGAGCTCGTCGCCAAGAACGGGCTCTATGCGAGGCTGCAGTTCGAGGGCGCGTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
58.537 |
87.234 |
0.511 |
| rcrQ | Streptococcus mutans UA159 |
54.762 |
89.362 |
0.489 |
| comA | Streptococcus pneumoniae TIGR4 |
51.22 |
87.234 |
0.447 |
| comA | Streptococcus pneumoniae Rx1 |
51.22 |
87.234 |
0.447 |
| comA | Streptococcus mitis NCTC 12261 |
51.22 |
87.234 |
0.447 |
| comA | Streptococcus pneumoniae D39 |
51.22 |
87.234 |
0.447 |
| comA | Streptococcus pneumoniae R6 |
51.22 |
87.234 |
0.447 |
| rcrP | Streptococcus mutans UA159 |
47.727 |
93.617 |
0.447 |
| comA | Streptococcus mitis SK321 |
48.78 |
87.234 |
0.426 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
43.902 |
87.234 |
0.383 |