Detailed information NTG0909468

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SM121_RS01075
• Genome accession: NZ_CP139418
• Coordinates: 224000..224452 (-)
• Length: 150 a.a.
• NCBI ID: WP_151190960.1
• Uniprot ID: -
• Organism: Streptococcus dentalis strain S1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 219000..229452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SM121_RS01050 (SM121_01050)	folP	219430..220380 (-)	951	WP_320910980.1	dihydropteroate synthase	-
SM121_RS01055 (SM121_01055)	-	220543..221274 (-)	732	WP_320910981.1	type II CAAX endopeptidase family protein	-
SM121_RS01060 (SM121_01060)	-	221347..222540 (-)	1194	WP_003004202.1	acetate kinase	-
SM121_RS01065 (SM121_01065)	comYH	222592..223545 (-)	954	WP_155127115.1	class I SAM-dependent methyltransferase	Machinery gene
SM121_RS01070 (SM121_01070)	comGG	223576..224013 (-)	438	WP_320910982.1	competence type IV pilus minor pilin ComGG	-
SM121_RS01075 (SM121_01075)	comGF/cglF	224000..224452 (-)	453	WP_151190960.1	competence type IV pilus minor pilin ComGF	Machinery gene
SM121_RS01080 (SM121_01080)	comGE	224442..224729 (-)	288	WP_003004353.1	competence type IV pilus minor pilin ComGE	-
SM121_RS01085 (SM121_01085)	comYD	224695..225099 (-)	405	WP_003004513.1	competence type IV pilus minor pilin ComGD	Machinery gene
SM121_RS01090 (SM121_01090)	comYC	225089..225406 (-)	318	WP_003013558.1	competence type IV pilus major pilin ComGC	Machinery gene
SM121_RS01095 (SM121_01095)	comYB	225403..226434 (-)	1032	WP_320911301.1	competence type IV pilus assembly protein ComGB	Machinery gene
SM121_RS01100 (SM121_01100)	comYA	226367..227308 (-)	942	WP_155127112.1	competence type IV pilus ATPase ComGA	Machinery gene
SM121_RS01105 (SM121_01105)	-	227396..227785 (-)	390	WP_037615753.1	DUF1033 family protein	-
SM121_RS01110 (SM121_01110)	-	228007..229110 (-)	1104	WP_320910983.1	glycosyl hydrolase family 8	-

Sequence

Protein

• Length: 150 a.a.
• Molecular weight: 17277.70 Da
• Isoelectric Point: 6.1390

>NTDB_id=909468 SM121_RS01075 WP_151190960.1 224000..224452(-) (comGF/cglF) [Streptococcus dentalis strain S1]
MWNKGKVKAFTLLEALVALLVLSGGVLVFQGLTKLLHAELDYQAHQKQEEWILFQQQLQVELDRSHFEKVADNHIYLVQD
QKPIAIGQSKGDDIRKTDDKGRGYQPMISGVHSSQIWQEGELLHLRLNFEEGLEREYVYHVVPAIQNEKS

Nucleotide

• Length: 453 bp

>NTDB_id=909468 SM121_RS01075 WP_151190960.1 224000..224452(-) (comGF/cglF) [Streptococcus dentalis strain S1]
ATGTGGAATAAAGGAAAGGTAAAGGCCTTTACCCTGCTCGAAGCCTTGGTCGCTCTCTTGGTGCTCAGTGGGGGAGTGTT
GGTCTTTCAAGGCTTAACCAAGCTCCTGCATGCTGAATTGGACTACCAGGCGCATCAAAAGCAAGAAGAATGGATACTTT
TTCAGCAACAATTGCAGGTGGAATTGGACCGGAGTCATTTTGAAAAAGTAGCGGACAATCATATCTACTTGGTTCAGGAT
CAAAAACCAATTGCTATTGGCCAATCTAAAGGAGATGATATCCGAAAAACAGATGATAAGGGCAGGGGCTATCAGCCTAT
GATTTCAGGTGTTCACTCTAGTCAGATTTGGCAGGAGGGAGAGTTGCTTCATCTGCGTTTGAATTTTGAAGAAGGTCTAG
AAAGGGAGTATGTCTACCATGTGGTACCAGCGATACAAAATGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (43-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	55.396	92.667	0.513
comGF/cglF	Streptococcus mitis SK321	54.676	92.667	0.507
comGF/cglF	Streptococcus pneumoniae Rx1	55.882	90.667	0.507
comGF/cglF	Streptococcus pneumoniae D39	55.882	90.667	0.507
comGF/cglF	Streptococcus pneumoniae R6	55.882	90.667	0.507
comGF/cglF	Streptococcus pneumoniae TIGR4	55.882	90.667	0.507
comYF	Streptococcus mutans UA159	42.647	90.667	0.387
comYF	Streptococcus mutans UA140	42.647	90.667	0.387
comGF	Lactococcus lactis subsp. cremoris KW2	38.298	94	0.36