Detailed information NTG0909048

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: SM130_RS19020
• Genome accession: NZ_CP139348
• Coordinates: 4101226..4102290 (-)
• Length: 354 a.a.
• NCBI ID: WP_102826237.1
• Uniprot ID: A0A2N8RY02
• Organism: Stutzerimonas stutzeri strain KC
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4096226..4107290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SM130_RS18995 (SM130_18995)	aroK	4096754..4097299 (-)	546	WP_102826232.1	shikimate kinase AroK	-
SM130_RS19000 (SM130_19000)	pilQ	4097305..4099455 (-)	2151	WP_102826233.1	type IV pilus secretin PilQ	Machinery gene
SM130_RS19005 (SM130_19005)	pilP	4099510..4100037 (-)	528	WP_102826234.1	type 4a pilus biogenesis lipoprotein PilP	-
SM130_RS19010 (SM130_19010)	pilO	4100034..4100657 (-)	624	WP_102826235.1	type 4a pilus biogenesis protein PilO	-
SM130_RS19015 (SM130_19015)	pilN	4100654..4101226 (-)	573	WP_102826236.1	type 4a pilus biogenesis protein PilN	-
SM130_RS19020 (SM130_19020)	comM	4101226..4102290 (-)	1065	WP_102826237.1	pilus assembly protein PilM	Machinery gene
SM130_RS19025 (SM130_19025)	-	4102471..4104906 (+)	2436	WP_102826238.1	penicillin-binding protein 1A	-
SM130_RS19030 (SM130_19030)	-	4104975..4106243 (-)	1269	WP_102826239.1	malic enzyme-like NAD(P)-binding protein	-
SM130_RS19035 (SM130_19035)	-	4106399..4107193 (-)	795	WP_102826240.1	thermonuclease family protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37706.19 Da
• Isoelectric Point: 4.6880

>NTDB_id=909048 SM130_RS19020 WP_102826237.1 4101226..4102290(-) (comM) [Stutzerimonas stutzeri strain KC]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKMIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLASQLGAGHGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLVPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASISGLDHMIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=909048 SM130_RS19020 WP_102826237.1 4101226..4102290(-) (comM) [Stutzerimonas stutzeri strain KC]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTCCTCGAATT
AAGTCGATCAGGTAATCGGTACCGTGTCGAGGCGTATGCCGTTGAGCCGCTTCCGCCGAACGCTGTGGTCGAAAAGAACA
TCGCCGAGCTTGAGGGCGTTGGTCAGGCTTTGCAGCGCGTAGTAGCCAAGGCTAAGACAGGGTGTAAGTCTGCCGTAGTC
GCTGTTTCGGGATCTGCGGTCATTACCAAGATGATCGAGATGGATGCCGGGCTGTCCGATGAGGAGCTCGAGAATCAGTT
GAAGATCGAGGCAGACCAGTACATCCCTTACCCGCTCGAAGAGGTTGCAATCGACTTTGAGGTTCAGGGCCCAGCACCTC
GTGCCCCAGGCCGTGTTGAAGTCCTGCTTGCAGCGTGTCGCAAAGAGAACGTCGAAATTCGCGAGGCGGCCTTGGCGCTG
GCTGGGCTCACCGCCAAAGTGGTTGACGTTGAAGCCTATGCGCTTGAGCGATCTTACGGCCTGCTGGCCTCTCAGTTGGG
AGCCGGGCACGGCGAGCTCACCGTGGCGGTTGTGGATATCGGTGCGACGATGACAACCCTTAGCGTGTTGCACAACGGCC
GTACGATCTATACGCGGGAGCAGCTGTTCGGTGGTCGTCAACTGACGGAAGAAATACAGAGGCGCTACGGGCTATCCCAA
GAGGAAGCCGGCCTCGCCAAGAAGCAAGGTGGTCTCCCAGACGACTATGACAGTGAGGTCTTGGTTCCGTTCAAGGAGGC
TGTTGTTCAGCAGGTCTCTCGCTCGCTGCAGTTCTTCTTCGCCGCTGGGCAATTCCATGATGTCGACTGCATTCTGCTCG
CAGGCGGGACGGCGTCGATTTCCGGTCTGGATCACATGATCCAGCAGAAGATCGGTACGCAGACTCTAGTGGCGAATCCG
TTTGCCGATATGGCTTTGAGTAGCAAGGTCAACGCGGGAGCGCTGGCCAGTGATGCGCCGGCATTGATGATTGCCTGTGG
CTTGGCGCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A2N8RY02

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.65	100	0.557
pilM	Acinetobacter baumannii D1279779	55.65	100	0.557
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463