Detailed information NTG0908334

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SOI71_RS09940
• Genome accession: NZ_CP139251
• Coordinates: 2076045..2076800 (-)
• Length: 251 a.a.
• NCBI ID: WP_104074597.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain MCR53
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2071045..2081800

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI71_RS09910 (SOI71_09900)	-	2071352..2071792 (-)	441	WP_014206600.1	SRPBCC family protein	-
SOI71_RS09915 (SOI71_09905)	tadA	2071863..2072366 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
SOI71_RS09920 (SOI71_09910)	hibch	2072372..2073496 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
SOI71_RS09925 (SOI71_09915)	ung	2073493..2074206 (-)	714	WP_005069527.1	uracil-DNA glycosylase	-
SOI71_RS09930 (SOI71_09920)	-	2074260..2074856 (-)	597	WP_017386831.1	6-pyruvoyl trahydropterin synthase family protein	-
SOI71_RS09935 (SOI71_09925)	gspK	2075085..2076044 (-)	960	WP_104074596.1	type II secretion system minor pseudopilin GspK	-
SOI71_RS09940 (SOI71_09930)	xcpW	2076045..2076800 (-)	756	WP_104074597.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SOI71_RS09945 (SOI71_09935)	xcpV	2076800..2077180 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
SOI71_RS09950 (SOI71_09940)	-	2077170..2077724 (-)	555	WP_104074598.1	type II secretion system protein	-
SOI71_RS09955 (SOI71_09945)	-	2077731..2078339 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
SOI71_RS09960 (SOI71_09950)	ycfH	2078376..2079149 (-)	774	WP_104074599.1	TatD family hydrolase	-
SOI71_RS09965 (SOI71_09955)	pilZ	2079167..2079508 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
SOI71_RS09970 (SOI71_09960)	holB	2079519..2080499 (-)	981	WP_068566161.1	DNA polymerase III subunit delta'	-
SOI71_RS09975 (SOI71_09965)	kdsB	2080513..2081274 (-)	762	WP_068566158.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28709.89 Da
• Isoelectric Point: 9.8689

>NTDB_id=908334 SOI71_RS09940 WP_104074597.1 2076045..2076800(-) (xcpW) [Acinetobacter pittii strain MCR53]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCAQTKLRFVNPRSGFTLVELLVSIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSGNQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=908334 SOI71_RS09940 WP_104074597.1 2076045..2076800(-) (xcpW) [Acinetobacter pittii strain MCR53]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCCCGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCTGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTTCAATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGGCAATCAAGGCGGGCAATTGCGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGACTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	79.2	99.602	0.789