Detailed information NTG0908090

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: SON02_RS10655
• Genome accession: NZ_CP139211
• Coordinates: 2459613..2460839 (+)
• Length: 408 a.a.
• NCBI ID: WP_135028342.1
• Uniprot ID: -
• Organism: Streptococcus sp. LysM4
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2454613..2465839

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SON02_RS10640 (SON02_10610)	-	2457945..2458784 (+)	840	WP_135028348.1	thymidylate synthase	-
SON02_RS10645 (SON02_10615)	-	2458904..2459416 (+)	513	WP_135028346.1	dihydrofolate reductase	-
SON02_RS10650 (SON02_10620)	-	2459419..2459589 (+)	171	WP_135028344.1	hypothetical protein	-
SON02_RS10655 (SON02_10625)	clpX	2459613..2460839 (+)	1227	WP_135028342.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
SON02_RS10660 (SON02_10630)	yihA	2460849..2461436 (+)	588	WP_135028340.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
SON02_RS10665 (SON02_10635)	-	2462084..2462464 (+)	381	WP_135028338.1	hypothetical protein	-
SON02_RS10670 (SON02_10640)	rplJ	2462809..2463309 (+)	501	WP_075098255.1	50S ribosomal protein L10	-
SON02_RS10675 (SON02_10645)	rplL	2463384..2463752 (+)	369	WP_135028336.1	50S ribosomal protein L7/L12	-
SON02_RS10680 (SON02_10650)	-	2463951..2464124 (+)	174	WP_001168336.1	hypothetical protein	-
SON02_RS10685 (SON02_10655)	-	2464121..2464939 (+)	819	WP_000822785.1	replication initiator protein A	-

Sequence

Protein

• Length: 408 a.a.
• Molecular weight: 45584.24 Da
• Isoelectric Point: 4.6125

>NTDB_id=908090 SON02_RS10655 WP_135028342.1 2459613..2460839(+) (clpX) [Streptococcus sp. LysM4]
MTVHHPSELIYCSFCGKNQEEVKKIIAGNNVFICNECVELAQEIIREELAEEVLIDLAETPKPQELLTILNHYVIGQERA
KRALAVAVYNHYKRINFQDSREENDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENIL
LKLLQAADFNIDRAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQELIQLDTKN
ILFIVGGAFDGIEEIVKQRMGEKIIGFGHNNRAIDEKESYMQHIIADDIQKFGIIPELIGRLPVFAALDQLTIEDLIRIL
TEPKNALVKQYQTLLSYDGVELEFDREALEEIAKRAIERKTGARGLRSIIEETMLDIMFEVPSQDDIKRVRITKEAVDGQ
AQPILETA

Nucleotide

• Length: 1227 bp

>NTDB_id=908090 SON02_RS10655 WP_135028342.1 2459613..2460839(+) (clpX) [Streptococcus sp. LysM4]
ATGACAGTACATCATCCATCAGAGCTTATTTATTGCTCATTTTGTGGAAAAAATCAAGAAGAAGTAAAGAAAATTATTGC
AGGAAACAATGTATTTATTTGTAATGAATGTGTGGAATTGGCCCAGGAGATTATTCGCGAAGAATTAGCAGAAGAAGTCT
TGATAGACTTGGCTGAAACACCAAAACCACAGGAATTACTAACGATTTTAAACCACTATGTCATTGGTCAAGAGCGAGCT
AAGCGAGCCTTGGCAGTAGCTGTTTATAACCACTACAAACGAATCAATTTCCAAGATAGTCGAGAAGAAAATGATGTGGA
TTTACAAAAATCGAATATTCTCATGATTGGACCGACTGGTTCTGGCAAGACCTTCCTTGCTCAAACCTTGGCTAAAAGTC
TGAATGTCCCATTTGCTATTGCTGATGCAACGGCCTTGACAGAAGCGGGGTACGTAGGAGAAGATGTTGAAAATATCCTT
TTGAAATTGCTCCAGGCAGCTGATTTTAACATTGACCGCGCAGAGCGTGGCATTATTTATGTAGATGAAATTGATAAAAT
TGCTAAAAAAGGAGAAAATGTTTCTATTACGCGTGATGTTTCAGGAGAAGGTGTGCAGCAAGCACTTCTAAAAATTATTG
AGGGAACAGTAGCGAGCGTTCCACCACAAGGTGGTCGCAAGCATCCGCAGCAGGAACTGATTCAGTTGGATACTAAGAAT
ATTCTCTTTATCGTAGGGGGAGCCTTTGATGGTATCGAAGAAATCGTGAAGCAGCGTATGGGAGAAAAAATCATTGGTTT
CGGCCACAATAACCGTGCAATTGATGAAAAAGAATCGTATATGCAACACATCATTGCAGATGATATTCAAAAATTTGGTA
TTATTCCTGAGCTAATTGGTCGCTTACCTGTCTTTGCAGCTCTTGATCAGTTAACAATAGAAGATTTGATTCGCATTTTA
ACAGAGCCGAAAAACGCCCTTGTCAAACAATACCAAACCTTACTTTCTTATGATGGTGTCGAGTTAGAATTTGATAGGGA
AGCGCTGGAAGAAATTGCGAAACGAGCGATTGAACGCAAGACAGGAGCACGCGGTCTTCGCTCGATTATCGAAGAAACCA
TGCTTGATATTATGTTTGAAGTGCCGAGTCAAGATGATATTAAGCGCGTACGAATTACCAAAGAAGCAGTGGATGGACAA
GCTCAACCAATCCTAGAAACGGCATAA

Domains

Predicted by InterproScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-47)

• AAA domain (Cdc48 subfamily) (AAA_2) (109-304)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	84.712	97.794	0.828
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.002	99.755	0.569