Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   SON02_RS07880 Genome accession   NZ_CP139211
Coordinates   1792522..1793253 (+) Length   243 a.a.
NCBI ID   WP_135029090.1    Uniprot ID   -
Organism   Streptococcus sp. LysM4     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context

Location: 1787522..1798253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SON02_RS07860 (SON02_07835) - 1788231..1788440 (+) 210 WP_075098784.1 hypothetical protein -
  SON02_RS07865 (SON02_07840) - 1788686..1789435 (-) 750 WP_135029083.1 amino acid ABC transporter ATP-binding protein -
  SON02_RS07870 (SON02_07845) - 1789428..1790993 (-) 1566 WP_135029085.1 ABC transporter substrate-binding protein/permease -
  SON02_RS07875 (SON02_07850) - 1791120..1791959 (+) 840 WP_135029088.1 undecaprenyl-diphosphate phosphatase -
  SON02_RS07880 (SON02_07855) mecA 1792522..1793253 (+) 732 WP_135029090.1 adaptor protein MecA Regulator
  SON02_RS07885 (SON02_07860) - 1793250..1794428 (+) 1179 WP_135029092.1 glycosyltransferase family 4 protein -
  SON02_RS07890 (SON02_07865) sufC 1794788..1795558 (+) 771 WP_135029094.1 Fe-S cluster assembly ATPase SufC -
  SON02_RS07895 (SON02_07870) sufD 1795588..1796850 (+) 1263 WP_135029096.1 Fe-S cluster assembly protein SufD -
  SON02_RS07900 (SON02_07875) - 1796857..1798086 (+) 1230 WP_135029098.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 28221.95 Da        Isoelectric Point: 4.0161

>NTDB_id=908070 SON02_RS07880 WP_135029090.1 1792522..1793253(+) (mecA) [Streptococcus sp. LysM4]
MKMKQISDSTLKITIKMEDLEDRGMEIADFLVPQEKTEEFFYTVLDELDLPVTFRESGMLSFRVTPKPDKVDIFVTKSDI
DQHLNFDDFTEMADLDELSQMTPDELLKTLEKTIREKSVGDEKAVQQLEQVEADEVEVEEVDREDRQYIYYILDFASLQE
AVQFVSLVDFTIEESELYKMNGRYYMTVLINIENRSTYYPDYILSRMLEHADDTPISRAVLQEHGVLLLPVGAIDELGKV
SLV

Nucleotide


Download         Length: 732 bp        

>NTDB_id=908070 SON02_RS07880 WP_135029090.1 1792522..1793253(+) (mecA) [Streptococcus sp. LysM4]
ATGAAGATGAAACAAATTAGTGATTCCACCTTGAAAATCACAATAAAAATGGAAGACTTGGAAGACCGTGGAATGGAAAT
TGCAGATTTTCTAGTGCCACAGGAAAAGACAGAGGAGTTTTTCTACACGGTTTTAGATGAATTGGATTTACCAGTAACTT
TCCGCGAAAGCGGTATGTTGAGTTTCCGTGTGACACCAAAGCCAGACAAGGTGGATATCTTTGTCACCAAGTCAGATATT
GATCAACATTTAAACTTCGATGATTTTACGGAGATGGCAGATTTGGATGAGCTTTCGCAAATGACACCAGATGAACTGTT
AAAGACACTTGAAAAGACTATACGAGAAAAGAGTGTGGGGGACGAAAAAGCTGTCCAACAGTTGGAACAAGTTGAAGCAG
ATGAAGTAGAAGTGGAAGAAGTGGATAGAGAAGATCGCCAGTACATTTACTATATTCTGGATTTTGCAAGTTTACAGGAG
GCAGTTCAATTTGTTTCGCTGGTTGATTTTACCATTGAAGAATCGGAACTCTACAAGATGAACGGTCGATATTATATGAC
TGTCTTAATCAATATTGAAAATCGTTCCACATACTATCCAGATTATATCTTATCACGGATGCTAGAACATGCAGATGATA
CGCCTATCTCGCGTGCAGTTCTTCAAGAACACGGAGTTCTCTTGTTGCCGGTCGGGGCGATTGATGAGCTTGGGAAGGTG
AGCTTGGTATGA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

57.959

100

0.584
  mecA Streptococcus pneumoniae D39

57.959

100

0.584
  mecA Streptococcus pneumoniae R6

57.959

100

0.584
  mecA Streptococcus pneumoniae TIGR4

57.959

100

0.584
  mecA Streptococcus mutans UA159

51.867

99.177

0.514
  mecA Streptococcus thermophilus LMD-9

46.154

100

0.469
  mecA Streptococcus thermophilus LMG 18311

45.749

100

0.465